Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01719 ATGGGCAAAATCAAGCTTCAGGCACTTCTCTTCTCTGCTTGCTCGAACCCTAGTTCTCAATTTCAGGACGGTATACCTGAACCTGCACTGGGATTTAACTCTGTTGGTGGCAATTCTGCTTCTCTGGTTCTCAATTTTTTTAAGGGAGGAACTATGGTGACATATGGTGGAATGTCTAAAAAACCTGTCACCGCATCAACTTCAGCCTTCATATTTAAGCTAACAATAAATTCTGGAGGGGTTTCTTCCTTTGCCCTTTTCAATGTCCATGGGAGTGATGATGCATCTCTAAAAGAAGCAGCAGCTGTCATAAAGTTATCTTCATCGAGAATGGCAACACAGTCCGAATGTCTCGGATATGAATTTGCCAAATTTAGGCTAGAGTCATTCACAATACCAGTTCAGAATGGCTCCAAATAA 420 0.4167 MGKIKLQALLFSACSNPSSQFQDGIPEPALGFNSVGGNSASLVLNFFKGGTMVTYGGMSKKPVTASTSAFIFKLTINSGGVSSFALFNVHGSDDASLKEAAAVIKLSSSRMATQSECLGYEFAKFRLESFTIPVQNGSK 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01719 139 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 74 IPR036291 -
Trre6g01719 139 Gene3D - 22 77 - -
Trre6g01719 139 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 72 124 IPR035010 GO:0004721|GO:0009737|GO:0043622
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01719 Trre-Chr6 14026611 14027796 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01719 72 125 Protein tyrosine phosphatase (PTP) family AT5G23720 68.519 4.88e-17 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01719 K07512 - aew:130791595 86.6557