Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01699 ATGGATTACTACAACATCCTTAAAGTGAATCGAAATGCAACCGAAGACGATTTAAAAAAATCATACAAAAAACTTGTATTGGTATGGCATCCAGACAAAAACCCTATCAACAAAACCGAAGCTGAAGCCAAATTCAAACTCATTTCAGAAGCTTATGATGTTTTAAGCGATCCACAGAAACGTAAGATCTATGATCGTTACGGTGAAGAAGCGTTAAAATCCGGTGAAGTTCCTCCACCATCTCAGAAACATTCTTCTTATGCTTCTTCTTCATCTTCTTCTTCCTCTTCGCGCCCGTTTCGGAATAAACACCCTCAGAATAATACTACTTCTTTTCGCTTTAATCCTAGGGATGCCGAAGATATTTATGCTGAGATCTTTGGTGAAGCTGGTCCGGAAAATGTGGGGAATCGTAGGACATCGAATGGTGTGCCGGCTGGTGGTAGTCAGGCGAGGAGGAAGGCTGCTCCTGTTGAGAGGCCATTGCCTTGTAGTTTGGAAGATCTTTATACAGGAGTTGATAAGAAGATGAAGATTTCTAGGACAATTACTGATTTTTTTGGGAAGAGTCGGACCGAGGACGAGATTTTGACTATTAAACTAAAACCTGGCTGGAAAAAAGGAACAAAGGTTACCTTCCCAGAGAAGGGTAACCAGGAGCATGGTGTTATCCCGGCAGACATTATTTTTGTAATTGACGAGAAACCACATGCTCGTTATACAAGAGATGGTCATGATTTGATTATTAACCAAAGGATAAGTCTTGTTGACGCTCTTACAAGTAAAACGTTAGAAATCCCCACCTTGGATGGAAGGAATCTCATGGTCCCATTGCCAGGTATAGTCACACCTGGCTATGTGCACGAAGTCCCTAATGAAGGAATGCCTATATCTAGAGAACCTGGGAGGAAAGGGGTTTTGAAAATTAAGATTGATGTCAAGTATCCCACGAGTCTAACTCCTCAGCAAAAAATTGATCTAAGGAGAGTCTTAGGTTGA 999 0.4134 MDYYNILKVNRNATEDDLKKSYKKLVLVWHPDKNPINKTEAEAKFKLISEAYDVLSDPQKRKIYDRYGEEALKSGEVPPPSQKHSSYASSSSSSSSSRPFRNKHPQNNTTSFRFNPRDAEDIYAEIFGEAGPENVGNRRTSNGVPAGGSQARRKAAPVERPLPCSLEDLYTGVDKKMKISRTITDFFGKSRTEDEILTIKLKPGWKKGTKVTFPEKGNQEHGVIPADIIFVIDEKPHARYTRDGHDLIINQRISLVDALTSKTLEIPTLDGRNLMVPLPGIVTPGYVHEVPNEGMPISREPGRKGVLKIKIDVKYPTSLTPQQKIDLRRVLG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01699 332 Gene3D - 157 235 - -
Trre6g01699 332 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 331 - -
Trre6g01699 332 SMART dnaj_3 1 60 IPR001623 -
Trre6g01699 332 FunFam Dnaj homolog subfamily b member 154 235 - -
Trre6g01699 332 MobiDBLite consensus disorder prediction 130 157 - -
Trre6g01699 332 CDD DnaJ_C 156 319 - -
Trre6g01699 332 MobiDBLite consensus disorder prediction 71 115 - -
Trre6g01699 332 FunFam DnaJ subfamily B member 13 237 317 - -
Trre6g01699 332 PRINTS DnaJ domain signature 22 37 IPR001623 -
Trre6g01699 332 PRINTS DnaJ domain signature 40 60 IPR001623 -
Trre6g01699 332 PRINTS DnaJ domain signature 60 79 IPR001623 -
Trre6g01699 332 PRINTS DnaJ domain signature 4 22 IPR001623 -
Trre6g01699 332 SUPERFAMILY HSP40/DnaJ peptide-binding domain 240 324 IPR008971 GO:0006457|GO:0051082
Trre6g01699 332 Gene3D DnaJ domain 1 140 IPR036869 -
Trre6g01699 332 MobiDBLite consensus disorder prediction 79 115 - -
Trre6g01699 332 SUPERFAMILY HSP40/DnaJ peptide-binding domain 152 248 IPR008971 GO:0006457|GO:0051082
Trre6g01699 332 CDD DnaJ 2 57 IPR001623 -
Trre6g01699 332 Gene3D - 237 317 - -
Trre6g01699 332 ProSiteProfiles dnaJ domain profile. 2 68 IPR001623 -
Trre6g01699 332 SUPERFAMILY Chaperone J-domain 1 80 IPR036869 -
Trre6g01699 332 ProSitePatterns Nt-dnaJ domain signature. 45 64 IPR018253 -
Trre6g01699 332 Pfam DnaJ domain 2 65 IPR001623 -
Trre6g01699 332 Pfam DnaJ C terminal domain 159 316 IPR002939 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01699 Trre-Chr6 13885330 13888294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01699 3 72 C2H2 Transcription Factor Family AT1G74250 35.135 7.53e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01699 K09510 - gmx:100819472 446.432