Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01692 ATGGCTAATATTGAACCAAAACATGTGGTTGTGATACAAGATGCATCTAAACTAAATTTTAAAGTATTTTCTTGGGTTATTAATGGATTATCACTCAAACCAGCAGATATGGTCACCCTATTTGCAATCCTGCATGAAGTTTACAATCCTATGGGGTATAAAAGCATATTACACAACAATGGACTAGTTGGAGTAAACCAAAGGATCATTGAGGAAGAACTTGCAAGGAAGAAGGAAGAGTATCTAAACCATGAAGAGCTTGCAAGGATTGCTAAATTGTATGAAACAAATGAGGTTGCATTCAAGATACAGTTATATGCAGGATCTTCACCAAAAGATTTTGCTATTGAAGGAGCTAAAAACCTAAAGGCAACTTGGGTTATACTTGACAGGCAAATGAAGAAAGATGAGGAATTTTTCCTGCAGAAGCTTTCTTGTGGTATATCTAGAATATTAGGTAAAACTCGCATCGAACGCCTAAGAGGACCTATTGAACTCGCAGTTGAAATACCATGCAGCGATCATCCTTCTGCCGATAGTTTACCAGAAAGTCAATGTGGAGATGTCCCCAAGAGTCCAATCAATGTCGAAGGGACGAGTAAAATTCATTGCAGGTCTGATAAGGATGAAGGGTGCTCAACATTCAGTCCTAACATTAATGAAAAAACATGTGAGACAAGTACTGATCATGCTAGCGTGGATGAAACTGATATAAACAGAAACCAAATCATCGACAAAATAGAAGGAGATAAGCAATGCCATGATGAAGAACATAATGAAAAAATATCTCATGACGATGATAGGGACACAACACTTGTGACTAACAATGATCAAACAAAAGATCTTCATATAAGCCAAGATCAAACAAGAAATGGCTCGGTATGCTCTATGTGCTCCGTTTGCAAAACAAGAAGACCTAATATTGAATGGCAAAAGGAATTTACTTATGAAGAAATTGAATCAGCAACAGATGGATTTTCATTGAAGAACTGTCTCTCCGAAAGTGGAAATCCATTTTCCACTTTCAAAGGCAAGCTGGAGGGAGAGGTGAGAATAGTAGTTAAGCAGCATGAAATAACAAACATTCAAGCAAAGGAAAAAATGAAGTCAGAAGTTCAAACTATTCTCAAAGCTAGACATAACAATGTGGTCATGCTATTAGGTTCATCTACGAAAGACCGTTTCATGTTGATTGTATATGAGTATGCTTGCAATGGTTCACTTGACATGTATCTCTCAAGTGAAAGATGCAGACCATTGGTCTGGAGTGAAAGGCTGAGAGTGGCAATAGGTCTTTGCAGAGGTCTAAAGTATCTACATGATAATAACATTATTCATGGAAATATAAAACCAAGCAATATTCTTCTAACACATGACTTCAAACCACTGCTTGGAGATTTTGACCTCGGAAAAAAACTTGATCTGAAGAAGTCCTTCAATAATAAAAGCATAGGGAATTCTGAATACGTAGCACCGGAGTATCTGGAGAAGGGGAAACTATCGACTAAAACAGATGTATACTCGTTTGGTGTTATTATTTTAGAGTTGATTACAGGACGTAAAGCCACCGATAAAATATCAGGAGAAAAAAGACTAGTTGGATGGGCAAAGCCTCTTCTAGGAAGTAAGAAGTATTCGGAGTTGGTGGATCCTATAATAAGCAAAGCATATGAAGAAGACCAACTTCACTGGTTAGTACAAGTAGTATCAAAATGTCTCAAAAAGAAGCCTAAGGAAAGATTATCTATGAACATGGTTGCTTCGGCATTACAAGGCATAACTGATAGCGAACAATGTAACATTACAGAAGTCTTAACTTCACCAACATCAGGTTCTAGAATTGTGTCTGATATCAATGGTTCACAAGTTACATTACAAGGAATATCAGACAGAAAACAGTGTGTCATGACAGAGGACTCTCTTCCAGTTGTATCAAATTCACAATGTAACAAAGAAGTATGTCCAAAAGAAACTGATTATCGAAGTCAGAAAGTTGAGCAGACAGAGCCCTTTTCCTTTGAGGAAGAAAGTAGGCCGCAAAGTTTGGACTTGAAAAACATGATAACAAATCACCTGAGTGAGTTTGAAGAAAATCTGAAGAGAAACCGCAATGAGAATGGAATTTCGACTCAAGAAATTAGTATTAACCACATGATTGGTAAGGATCAGGAAGAGAAGAGCTCTATTCAAGTGAAAAGAGACTTAAGACCTATTAGTGGAATATTACTTCAAACGCAACCGCAGAGTAGCTTCAATGAGAATTTACATGATGAACATAAAGATGAAATCATTTTAGAGAAATCAAAATCCTCGGCATGCTCTATTTGCAAAAGTAAACGACCGAAAATCACAAGGATGAAAGACTTTACTTATGATGATCTCCTAGAAGCTACTAAAGGATTTTCAGTTGAGAACTCTCTATCAGAAAGTGAAAATGGACCTACATTTAAAGGGTTACTAGAGAGTAAAATGAAAATAGTTGTTAAGATACATCAAATTACTAAGTCTCAAGAAGAGAATATATTCCGGTCAGAAATTCAGTTGTTCACCAATGTTAGACACAAAAATGTTGTCATGCTGTTGGGGTTATGTGCAGAGAAAAGTCAATTGATGATTGTATATGAACATTTATGCAATGGTTCTCTTGACCATTACCTTTCAAGGGGAAGTTTCCAGTCATTGACATGGAAGGAAAGAATGAAAATAACCATAGGTACTGCAAGAGGTTTAAAATACCTACATGGGAATAACATAATTCATGGAAATATAAAAGCAAGTAACATTCTTCTAACACATGACTTTGAACCACTGATTGGAGATTTCGGCTTCAGAAAAACGAAGCTTGAACCAAAGAAGTCCTACAAAGATAAAAGTGCAAAAGATTTTGGATACACAGCACCCGAGTATACCGAGAATGGGAAATTATCAACTAAGATAGATGTGTACTCCTTTGGAGTGATTCTTTTAGAGCTGATCACCGGCCGGAGGGTAACAGACAAATTACCCGGGGGAAAAAGCCTTGTTGGATGGGCAAAGCCACTACTGGGAGGAAAGAAGTATGCACAATTAGTGGATTCAAAAATCAGTAACTCCTATGAACAAGAACAACTTCAATGGTTAGTCCAAGTAACAGAAAAATGTCTCAAAAAGAATCCTAAGGAAAGATATTCGATGAATATGGTTATATCTGCATTACAAGGAATCTCAGAATCAGACGACAGTTGTCTAATCGAAGATTCTTCTTCAGAAAACTCATATTTACCAAATGATGAGTCGGTCATGCCCACGACTAGTTCACAAGGTGAAATGATGGTTGATTTGGTAAGCCGGGAAACAAAACTGGTTGACACAAACACATACAAGGAAGAGACAAGCTCCAAAACAGAAATTACAACTAACGACATGATTGAACAGATTAAGGAAAATCAACAAAATAAAGAAAGATTCCACATGGAAGAGAAAGAGATAGAGAAAAAAGCAGTAGATAACCAACCAAAGATTATCCAGGACACAAAACAAATGCAAGACAGCTGTGATGATAAGGGTTTTTGGAATGAGAATGAAGACAAAACAATTTTGGAGAATATTTCAAAGTCTAGTTTATGCTCAATCTGCAAAAGTAGACGGCCAAATAATGAGTCGCAAAGGAAATTTACTTATGAAGAACTTCAAGCTGCTACAGAAGGATTTTCAATAAAGTATTCTCTATCTGAAGGTGAATATGGACCTGCCTTCAAAGGTCAGTTAGATAATAAGCTGAAAATAGCTATTAAGAAAATTCAAGTCACAAGCTTACAGGAACAGAAGGAGTTTATGTCAGAAGTCCAGTTGCTCATAAATACAAGACATGAAAACATGATTATGCTTCTAGGGCAAAGTGGTAGATTGTTGACTTGGAGAGAAAGGATGAAAATTGCAATAGGTGTATCAAGAGGCCTGAAGTATCTTCATGAGAATGACATAATACATGGAAGAGTAAAACCAAGTAACATTCTTCTAAATCATGACTATAAGCCATTGCTCGGAGATTTTGTGTTTAGAAAAGACGGACGTGAATTGAAGAATAGCTGCAAGGATAAAAGTGTTAGGAATTGTGGATATACTGCACCAGAGTGTAAGGAGAGTGGAAAACTATCAACAAAAGCAGATGTGTACTCTTTTGGAGTAGTTCTTTTAGAGTTGATCACAGGCTCGATGGTTTCGGATAAGATACATGGACAGAAATGTCTTATTGAATGGGCAAGGCCACTTCTTGGAGGAAGGGAGTACTTACAGTTGATGGATCCCGAAATCAGCAGCTCATATGATGAAGAAGAACTTGCTGCATTGGTCCTAATAACAGAAAAGTGTCTCAGAAAGAATCTGAAGGAAAGGTTTACAATGAATATGGTGGTCTCATTAATGCCGTCTGTAGTTGATAGCAATAACATCTACGCAATTGAAGACTCGTCATCAGATTCAGATGACTTATGTTGCTATTCAGATGAAACAAACTCATTTGAAGAAGATTTAGTCACAAAGATTGGTGAAGAAAGAGTGGACAACAAGACATGTAGAAAAGAGAATGAAACAAAATTTGATGAAAAGAGTGATTGGTGCAAAAGTAGAGGCAAAAATTGTATGGAAACACAAGAAAAAGAAAGATGTGAATCTTATGGTGGAGCTAAAGACTTTTTTCTAGATGGAGCTCAAGAATATATAGCATGTGGAGAACTTTTTAGCTTGTGTAATTCAATTTAA 4740 0.3665 MANIEPKHVVVIQDASKLNFKVFSWVINGLSLKPADMVTLFAILHEVYNPMGYKSILHNNGLVGVNQRIIEEELARKKEEYLNHEELARIAKLYETNEVAFKIQLYAGSSPKDFAIEGAKNLKATWVILDRQMKKDEEFFLQKLSCGISRILGKTRIERLRGPIELAVEIPCSDHPSADSLPESQCGDVPKSPINVEGTSKIHCRSDKDEGCSTFSPNINEKTCETSTDHASVDETDINRNQIIDKIEGDKQCHDEEHNEKISHDDDRDTTLVTNNDQTKDLHISQDQTRNGSVCSMCSVCKTRRPNIEWQKEFTYEEIESATDGFSLKNCLSESGNPFSTFKGKLEGEVRIVVKQHEITNIQAKEKMKSEVQTILKARHNNVVMLLGSSTKDRFMLIVYEYACNGSLDMYLSSERCRPLVWSERLRVAIGLCRGLKYLHDNNIIHGNIKPSNILLTHDFKPLLGDFDLGKKLDLKKSFNNKSIGNSEYVAPEYLEKGKLSTKTDVYSFGVIILELITGRKATDKISGEKRLVGWAKPLLGSKKYSELVDPIISKAYEEDQLHWLVQVVSKCLKKKPKERLSMNMVASALQGITDSEQCNITEVLTSPTSGSRIVSDINGSQVTLQGISDRKQCVMTEDSLPVVSNSQCNKEVCPKETDYRSQKVEQTEPFSFEEESRPQSLDLKNMITNHLSEFEENLKRNRNENGISTQEISINHMIGKDQEEKSSIQVKRDLRPISGILLQTQPQSSFNENLHDEHKDEIILEKSKSSACSICKSKRPKITRMKDFTYDDLLEATKGFSVENSLSESENGPTFKGLLESKMKIVVKIHQITKSQEENIFRSEIQLFTNVRHKNVVMLLGLCAEKSQLMIVYEHLCNGSLDHYLSRGSFQSLTWKERMKITIGTARGLKYLHGNNIIHGNIKASNILLTHDFEPLIGDFGFRKTKLEPKKSYKDKSAKDFGYTAPEYTENGKLSTKIDVYSFGVILLELITGRRVTDKLPGGKSLVGWAKPLLGGKKYAQLVDSKISNSYEQEQLQWLVQVTEKCLKKNPKERYSMNMVISALQGISESDDSCLIEDSSSENSYLPNDESVMPTTSSQGEMMVDLVSRETKLVDTNTYKEETSSKTEITTNDMIEQIKENQQNKERFHMEEKEIEKKAVDNQPKIIQDTKQMQDSCDDKGFWNENEDKTILENISKSSLCSICKSRRPNNESQRKFTYEELQAATEGFSIKYSLSEGEYGPAFKGQLDNKLKIAIKKIQVTSLQEQKEFMSEVQLLINTRHENMIMLLGQSGRLLTWRERMKIAIGVSRGLKYLHENDIIHGRVKPSNILLNHDYKPLLGDFVFRKDGRELKNSCKDKSVRNCGYTAPECKESGKLSTKADVYSFGVVLLELITGSMVSDKIHGQKCLIEWARPLLGGREYLQLMDPEISSSYDEEELAALVLITEKCLRKNLKERFTMNMVVSLMPSVVDSNNIYAIEDSSSDSDDLCCYSDETNSFEEDLVTKIGEERVDNKTCRKENETKFDEKSDWCKSRGKNCMETQEKERCESYGGAKDFFLDGAQEYIACGELFSLCNSI 1579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01692 1579 ProSiteProfiles Protein kinase domain profile. 801 1068 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01692 1579 Pfam Protein kinase domain 1297 1465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01692 1579 Pfam Protein kinase domain 352 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01692 1579 Pfam Protein tyrosine and serine/threonine kinase 1232 1291 IPR001245 GO:0004672|GO:0006468
Trre6g01692 1579 Pfam Protein tyrosine and serine/threonine kinase 804 1064 IPR001245 GO:0004672|GO:0006468
Trre6g01692 1579 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 877 1076 - -
Trre6g01692 1579 FunFam Proline-rich receptor-like protein kinase PERK8 288 402 - -
Trre6g01692 1579 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Trre6g01692 1579 Gene3D Transferase(Phosphotransferase) domain 1 404 609 - -
Trre6g01692 1579 Gene3D Transferase(Phosphotransferase) domain 1 877 1088 - -
Trre6g01692 1579 MobiDBLite consensus disorder prediction 251 271 - -
Trre6g01692 1579 ProSiteProfiles Protein kinase domain profile. 1230 1471 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01692 1579 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 403 602 - -
Trre6g01692 1579 Gene3D Transferase(Phosphotransferase) domain 1 1291 1479 - -
Trre6g01692 1579 SUPERFAMILY Protein kinase-like (PK-like) 784 1070 IPR011009 -
Trre6g01692 1579 FunFam Proline-rich receptor-like protein kinase PERK8 763 876 - -
Trre6g01692 1579 SUPERFAMILY Protein kinase-like (PK-like) 310 607 IPR011009 -
Trre6g01692 1579 Coils Coil 685 705 - -
Trre6g01692 1579 SUPERFAMILY Protein kinase-like (PK-like) 1213 1466 IPR011009 -
Trre6g01692 1579 Coils Coil 67 87 - -
Trre6g01692 1579 Gene3D Phosphorylase Kinase; domain 1 762 876 - -
Trre6g01692 1579 Gene3D Phosphorylase Kinase; domain 1 1193 1290 - -
Trre6g01692 1579 MobiDBLite consensus disorder prediction 1077 1098 - -
Trre6g01692 1579 PANTHER OS01G0253100 PROTEIN 693 1071 - -
Trre6g01692 1579 ProSiteProfiles Protein kinase domain profile. 316 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01692 Trre-Chr6 13829556 13837522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01692 314 602 Trihelix Transcription Factor Family AT5G38560 39.404 3.36e-56 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Trre6g01692 PK_Tyr_Ser-Thr 1.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01692 - - tpra:123916481 2787.29