Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre6g01691 | ATGGAAAAAGATTCTGAGAAACCCTACAAAGAGACTGAAAAGAAGATCAGCGATGAAGATGATGATGATAATGATGATGCTAAGATGATGATGAAGAAGCAAGAAGCTAAATCAACACACAAGTGCAATATTTGTGGCAAGAGTTTTAACAATGGAAAAGCATTAGGTGGTCATAGAAGATCTCACTTTCTTAAGAAAAAACCTAATCATGATCATCGTCATCAATCACCAGAGCTGAAAACCCCTAGTAAGAGTACTAGGGTTAGTTGTTTCAATGATGATGAAGATATTAGGATTTGTTATATTTGCAATAAGAAGTTTCCAACAAAGAATGCCTTGTATGGTCACATGAGATCTCATCCTGGTAGGGTTTGTAAAGGAGTAAGTCCTCCTTCAAATTATCATATTCAAAATTCTTCTTCTTCGAACAATTCTAATAAAAAAGAAGATCAAGATAATGATGTTGATGATGATGATGATGGTAATTTTTCTTTACCAAGATGGAAAAAGAGAGATAAAAGAGGTAGAAAATGTATTGGTAGTGTTGAGGCTGCGAAAAACCTATTGCATCTTCGTCACAACTGTGAGGTTTCGGGTTTGAACTCAAAGAGATCTGACTTTCCACTTCCGATTAAAAAAAGGGATTTTTTTGTTGGTGGGTCATCATCAAATGGGAACGGTAAAAAGGAGTTTGTGGTGAACAAGATTAAATTTGTTTTTAGTGGTTCATTGAAGATTGAAAACAAAAGTGATTGGAATGGTGATGATGATGATGATGATCATGATGATCAGGATGAGAGTGACAATATTAGTAATAAGAAACTAAAGACAAGTGAAGGTTTATGTGAATCTAGGGTTGATGAGAAACCGAGTAATCATTCTGAAGAGCAAAAAACTTTCAACTTTGATTTGAATGAGCCATATGTTATGGAGGATTAA | 939 | 0.344 | MEKDSEKPYKETEKKISDEDDDDNDDAKMMMKKQEAKSTHKCNICGKSFNNGKALGGHRRSHFLKKKPNHDHRHQSPELKTPSKSTRVSCFNDDEDIRICYICNKKFPTKNALYGHMRSHPGRVCKGVSPPSNYHIQNSSSSNNSNKKEDQDNDVDDDDDGNFSLPRWKKRDKRGRKCIGSVEAAKNLLHLRHNCEVSGLNSKRSDFPLPIKKRDFFVGGSSSNGNGKKEFVVNKIKFVFSGSLKIENKSDWNGDDDDDDHDDQDESDNISNKKLKTSEGLCESRVDEKPSNHSEEQKTFNFDLNEPYVMED | 312 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre6g01691 | 312 | SMART | c2h2final6 | 98 | 120 | IPR013087 | - | |
Trre6g01691 | 312 | SMART | c2h2final6 | 40 | 62 | IPR013087 | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Trre6g01691 | 312 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 40 | 67 | IPR013087 | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 249 | 312 | - | - | |
Trre6g01691 | 312 | PANTHER | C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED | 19 | 311 | IPR044653 | GO:0003700 | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 63 | 87 | - | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 266 | 300 | - | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 131 | 146 | - | - | |
Trre6g01691 | 312 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 98 | 122 | IPR013087 | - | |
Trre6g01691 | 312 | Gene3D | Classic Zinc Finger | 11 | 123 | - | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Trre6g01691 | 312 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 42 | 62 | IPR013087 | - | |
Trre6g01691 | 312 | MobiDBLite | consensus disorder prediction | 124 | 168 | - | - | |
Trre6g01691 | 312 | SUPERFAMILY | beta-beta-alpha zinc fingers | 39 | 120 | IPR036236 | - | |
Trre6g01691 | 312 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 100 | 120 | IPR013087 | - | |
Trre6g01691 | 312 | Pfam | C2H2-type zinc finger | 40 | 62 | - | - | |
Trre6g01691 | 312 | Pfam | C2H2-type zinc finger | 99 | 121 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre6g01691 | Trre-Chr6 | 13826277 | 13827215 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre6g01691 | 35 | 131 | C2H2 Transcription Factor Family | AT2G26940 | 33.028 | 7.07e-11 | 60.1 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2H2 | Trre6g01691 | zf-C2H2_6 | 2.7e-05 | CL0361 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre6g01691 | - | - | tpra:123915298 | 402.134 |