Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01671 ATGGCAACAAGAAAAGTGGACTTTGGTGAATCTTTATTCACTTCAATAAATCAAGTGCCTGATGAATATAATCTTATACATTATCAAACATACAATGTATGCATTGAACAACCACCAATGTTAATATCTGAAGGAATATGGGCTGGTCACACTGTACTCTCTGCTAAATCTACATTTACAATGTTGGAAATCCAAATAATTACCATTATTTTTATCACACAATGCTTACATTTCTTTCTCAAGCGCTTAGGATGTTCTTATTTTATTTCACAAGTCATGACCGGATTTCTTCTGGGTCCGTCGATACCGACAGGACCACTAGAAAAATACAAAAAGATGTTATTCCCATTTGGTGGTCCAGATATACTAAACACCATATCATGTTATGGTTTAATTGGCGTAGAAGAAACATTTAGTTTGCCGATTGTTTTTATATCTCATAGTGGTTGTTCTTTCGCCGTCATTGCTTCTTTCCTATGTGAGCTTGGAATCCTGAACTCGGAACTTGGCCGCCTTGCAATGTCATCGGCTTTCCTGATTGACATCTCAGCCGGTGTCTTCGCCGGTGCAATTGTATTAGGACTTGCTGTTCCTGAAGGACCACCATTAGGGTCAGAGTTGGTTAACCAATTAGAATTGTTCTCTTCATGGATTCTTACACCTATTTTTGTGACTTGTTGTGTAATGAAAGTGAATCTAACTATGTGTGGACCTCCTATTCTTATTGTTGTTATCAGTGGATTCATTATTTTGGTGCATACTATTAAGCTATTTGAGTGTGTCATTGTTTGCAAATATTGCAATATGCCTTCAAGTGATGGTCTTTGTTTAGCTCTCATTTTGAGTTGCAAAGGTGTCATTGATACTTGCTCCTTCATTCTTGTCTACGACGGAATGAAACAATCTCAAAAAGCAATAGGCGTTATGGTAATATCAACCTTAATCTTGTCCACAATCTCAAGAACGGGAGTGAAATTACTATACGACCCATCAAGAAAATATGCAGGGTATCAAAAAAGAAACATAATGAATTCGAAAAAAAACTTAGAGATTCGTTTAGTTGCGGTTGTACACAAAGCAAGTCATATGGTTCACATCAAGAATTTCCTAAACCTTTGTTCTCCGACACCAGACAACACACTCGTTGCAGATGTGTTACATTTGAGGGAATTAATTGGAAGAACAACACCTATTTTCATATCACATCGTCTCCAACAAAGAAAAGGATCCACACATAACTACTCGGGAGATTTTGTTGTTACATTCGACCTTTTTGAGCGTGACTATGCTGGTTCAGCAACAGTTAACACATACACAGCGATATCACCACCAGCGTTTATGCCCGAAGATGTTTGTTACCTTGCATTAGACAAAAATGCAGCTATTATAATTCTACCATTCCATGTAAGATGGGAACTAGATGGTTCAATTGAATCAGAAGACAACAATGTAAGATTATTGAATTCAAAGGTTTTGGAAAGAGCGCCTTGTTCGATTGGGATTTTGGTTAACCGTGCATCCACAACCACCAACATTTCAAATGCATATAAGGTAGCTATGATTTTCCTCGGTGGACCGGATGATAGAGAAGCCTTGTGTTTGGCTAAAAGGTTTTCTAAAAATGTAGACAACACTTTGTTTGTTTATAGATTGCGTTCGTGTGATCACGATATAACTGGTTGGGAGCAAATGATTGATGATGAGGAGTTAAGGGAAGTGCGTGGAGCCCATGTTAAACTCGAAAATGTCAAGTATGAAGAAAAAACTATAGAGGATGCATCTCAGACAACTAGTTTTATAAAGGAAATAGCTAATAATAAATTTGATTTTATTATAGTTGGGAGACGTTATGGACTTAAATCACCTCAAACAACTGGTTTGGAAAATTGGACTGAATATCCTGAATTAGGTGTCATCGGTGATTTGCTTGCTTCACGAGATATGAAAAGTAAAGCTTCAATTTTAGTTGTGCAACAACAACAACAAACTAAGTCTATTTCCTCCTAA 2007 0.3702 MATRKVDFGESLFTSINQVPDEYNLIHYQTYNVCIEQPPMLISEGIWAGHTVLSAKSTFTMLEIQIITIIFITQCLHFFLKRLGCSYFISQVMTGFLLGPSIPTGPLEKYKKMLFPFGGPDILNTISCYGLIGVEETFSLPIVFISHSGCSFAVIASFLCELGILNSELGRLAMSSAFLIDISAGVFAGAIVLGLAVPEGPPLGSELVNQLELFSSWILTPIFVTCCVMKVNLTMCGPPILIVVISGFIILVHTIKLFECVIVCKYCNMPSSDGLCLALILSCKGVIDTCSFILVYDGMKQSQKAIGVMVISTLILSTISRTGVKLLYDPSRKYAGYQKRNIMNSKKNLEIRLVAVVHKASHMVHIKNFLNLCSPTPDNTLVADVLHLRELIGRTTPIFISHRLQQRKGSTHNYSGDFVVTFDLFERDYAGSATVNTYTAISPPAFMPEDVCYLALDKNAAIIILPFHVRWELDGSIESEDNNVRLLNSKVLERAPCSIGILVNRASTTTNISNAYKVAMIFLGGPDDREALCLAKRFSKNVDNTLFVYRLRSCDHDITGWEQMIDDEELREVRGAHVKLENVKYEEKTIEDASQTTSFIKEIANNKFDFIIVGRRYGLKSPQTTGLENWTEYPELGVIGDLLASRDMKSKASILVVQQQQQTKSISS 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01671 668 Gene3D - 184 334 IPR038770 -
Trre6g01671 668 PANTHER CATION/H + ANTIPORTER 186 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01671 Trre-Chr6 13715941 13718837 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01671 186 661 Antiporter Super Family AT5G22900 37.725 1.02e-107 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01671 K26731 - gmx:100797272 677.167