Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01636 ATGACTTTTGATTTGTTTCTTCTTAGAGATATTGGTATTTCACTTTTCATTTTCTTAATCTCACACTTCTCCATAAGCTTAATTCTCAAAAACACTTCTAAAAATCTCCCACCAGGTCCTAAAGGATGGCCAATTCTTGGTGTTCTACCACATTTAGGAACCATGCCACATGTCACACTAGCAAACATGGCCAAGAAATTTGGACCCATCATGTACCTCAAAATGGGCACTTGTGACACTATTATTGCCTCAAGTCCAAAGGCAGCTAGAGCATTTCTCAAGACTTTGGACCATAATTTCCTAAATAGGCCCACTATTATAGGTGCAACCCATTTGGGCTATAATTCACAAGACCTTGTTTTTGCCAAATATGGACCTAAATGGAAACTACTTAGGAAACTAACAACCTTACACATGCTTGGTGGAAAAGCACTTCAAAATTGGGGTAATGTGAGAGAAAATGAGGTAAAAAATATGGTGAGATCCATTCATGAGATTGGAATAAAAGGTGAACCAATTGAGATTGGTGATTTGTTGAGTTGTGCAATAACAAATATGGTGAGTCAAGTTGTACTAAGCAAACGTATATTTGAAAATAAAGGACAAGAGTCAAAGGAATTTAAGGAAATGGTTGTTGAATTCATGACAATTTCTGGTGTCAACATTGGTGATTTTGTACCTTTCATTGGTTGGATGGATTTAGAAGGTGTGGTTAGTAAAATGAAAATTTTGCATAAGAAGTTTGATGTGTTTTTGACTAAAATGATTGAAGATCATGTGAAGTGTGCTCATGAACGTAAAGATAAACCAATTTTTTTGGATATTTTGATGGAAAATGGCAATGATCATTTTGGTGAGAGATTGAGTTTGTCCAACATCAAAGCTCTCTTATTGAATTTGTTCACTGCAGGGACAGATACATCATCTAGCATCATAGAATGGGCACTTGCTGAAATGCTAAGAAACCCAAACATCTTAATGGCTATTGTGGTGATAGAGTACATTTTAGGCACATTGGTGCACTCTTTTGATTGGAAATTACCAATTGGTGTTGAGCTAAACATGGATGAGTCCTTTGGACTTACTTTGCAAAAGGCAGTGCCTTTGTCAGCTATGGTTATTCCACGGTTGGTGGCGAATGTTTATGTTTGA 1152 0.3655 MTFDLFLLRDIGISLFIFLISHFSISLILKNTSKNLPPGPKGWPILGVLPHLGTMPHVTLANMAKKFGPIMYLKMGTCDTIIASSPKAARAFLKTLDHNFLNRPTIIGATHLGYNSQDLVFAKYGPKWKLLRKLTTLHMLGGKALQNWGNVRENEVKNMVRSIHEIGIKGEPIEIGDLLSCAITNMVSQVVLSKRIFENKGQESKEFKEMVVEFMTISGVNIGDFVPFIGWMDLEGVVSKMKILHKKFDVFLTKMIEDHVKCAHERKDKPIFLDILMENGNDHFGERLSLSNIKALLLNLFTAGTDTSSSIIEWALAEMLRNPNILMAIVVIEYILGTLVHSFDWKLPIGVELNMDESFGLTLQKAVPLSAMVIPRLVANVYV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01636 383 PANTHER CYTOCHROME P450 98A9 327 382 - -
Trre6g01636 383 Gene3D Cytochrome P450 28 329 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 Pfam Cytochrome P450 37 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 SUPERFAMILY Cytochrome P450 33 376 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01636 383 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01636 Trre-Chr6 13537093 13538781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01636 327 382 Cytochrome P450 AT5G07990 50.847 8.63e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01636 K13083 - qsu:112039568 423.32