Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01631 ATGGTCCTTTACATTGGTATTGGTGTAAGAGGGTTCATGATGAGACCATGTATTTTGGGTTCAGCACTTGTTATTGCTCTTTGTGTCTTCAGCAATTTGTTTAACTTCGCACAAGCACAAGTACAACCTCAAATTTTAAACGCAACTACAGATCCTTATGAAGCTGGAGTTATAAATTCAATATTTAGCAAATGGAATAAATCAGCAGATACAACTCAATGGAACATCAGCGGTGAAATATGTAGCGGAAATGCCATTGATAGCACAACTACCATTGATGATCTAACTTATAACCCATTCATCAAATGCGATTGTTCCTTTAACAATAAAACTATTTGTCGCATCACCGCACTGAAAGTGTATGCAATAGATGTGATTGGTGAAATTCCACCTGAGTTATGGACTCTAACTCATCTCACCAATTTGAACCTTGCCCAAAATTACTTGACGGGGTCTCTACCTCCTGCGATTGGAAATCTGACTCGTATGCAATACATGACCTTTGGCATCAATGCATTGTCAGGAGAGCTTCCAAAGGAATTGGGAAATCTTACTCAGTTGATTTCATTGTCTTTTGGGAATAACAAGTTATCAGGGTCTTTGCCATCTGAACTTGGGAAGCTGGTAAAGCTAGAACAACTCTACATGGATAGTTCTGGACTCAGTGGTCCAATGCCACGCACAATTGCAAGCCTTAAGAATTTGGGGATAGTATGGGCTTCAGACAATAAATTCACAGGTAGAATACCCGACTTCATAGGAAATTGGTCTAAGCTTCAAGTCTTGAGGTTTCAGGGTAATTCTTTTGAAGGTCCAATACCCTCATCATTTTCCAATTTGACTTCTTTGACAGAATTGAGAGTAAGTGGTTTATCTAATGATAGTTCCTCATTGAATGTAATAAGGAACATGAAGTCTTTGACAATCTTAGAATTGAGAAATAACAATATTTCTGGTTCCATTCCTTCCACCATAGGAGAACTTCAAAATTTGACCCAGCTGGACTTAAGCTTCAATAAAATCTCAGGAAAAATACCAGGATCAATTTTTAATTTGAGATCACTGGTTTCCTTGTTTCTTGGAAATAACACACTTAGTGGTACTCTCCCTCGGCAGAAAAGTTCAATTCTAAAGAACATAGACTTGTCATACAATGATCTATCAGGAAGTCTCCCCTCTTGGATAAACGAACCAAAGTTACAACTGAACATAGTTGCCAACAACTTTACAATAGTAAGTTCAAATATCAGTGGTTTGCCTACTGGGTTCAATTGTCTCCAGAAAAATTTTCCATGCAACCGTGGTGCGGCAAGATATTTTGACTTTGGAATCAAGTGCGGTGGTCCGCAAATTAGAACTACAGATGGAATTGTGTATCAGGCGGACAATGAGACACTTGGTCCTGCTACATACTTTGTTACTGATACAAGTAGATGGGCTGTTAGTAATGTTGGATTATTTACTGGGAACAACAATCCTCTATACAAAAGTTTTGTTTCAAATCAGTTCACTCATACTGTGAACTCAGAGATTTTTCAAACTGCTCGGCTCTCTCCATCATCATTAAGATATTACGGTCTGGGGCTAGAAAATGGTTTTTACAACATCACCCTCCAATTTGCGGAAACAGCTATTCTGGATTCTATTACCACATGGAAAAGCCTCGGGAGACGAGTCTTTGATATTTATATCCAGGGGACTCGTGTTTTGAAGGATTTTGACATACAAAGAGAAGCTGGAGGTGTGTCTTACAGAGCTGTTCAAAAGCAATTTAGGTCTGAAGTGAAAGAAAACTATCTTGAGGTACATCTTTTTTGGGCCGGAAAAGGGACTTGTTGTATACCTAGCCAAGGTACTTATGGACCCTTGATTCAAGCCATCAATGCTATCCCAGATTTCATACCTACTGTCAGCAATAAACCTCCCAGCACTAAAAAGAATAGAGCGGGTCTAATCATTGGAGTAGTTGTGGGTGTTGGAGCTGTTTTCTTTCTAGCAGTTTTTGCCATTTTCTATATCGTGCGAAGAAAACAATATGATGACGATGATGAGCTTTTAGGCATTGATACGATGCCGAACACTTTCACCTATTATGAATTAAAAAATGCTACAAGTGACTTCAATCGCGACAATAAACTTGGAGAGGGAGGTTTTGGACCTGTTTATAAGGGGACACTTAATGACGGAAGAATTGTGGCTGTAAAACAATTATCTATAGGATCCCATCAAGGAAAGAGCCAGTTTGTAGCTGAGATTGCAACTATATCTGCTGTGCAACACCGTAATCTTGTCAAATTATATGGATGTTGTATTGAAGGGAGTAAAAGACTTCTTGTCTACGAGTATTTAGAAAATAAGAGTCTTGATCAAGCATTGTTTGGAAATGTTTTATGCCTCAATTGGTCAACCCGCTATGATATTTGTATGGGTGTTGCGAGAGGTTTGACATATTTACACGAGGAGTCACGGCTCCGGATTGTGCACCGCGATGTGAAAGCTAGCAATATTCTACTCGACTCTGAGCTTGTCCCAAAAATATCTGACTTTGGATTGGCCAAATTATATGATGATAAAAAAACACATATAAGCACTCGTGTTGCTGGGACGATTGGATATCTTGCACCGGAGTATGCCATGCGTGGACACCTCACAGAGAAGGCGGATGTTTTTTCCTTTGGTGTTGTGGCTCTCGAGTTAGTTAGTGGGAGGCCAAATTCTGATTCAAGTTTAGAGGGAGAAAAAATGTATCTTCTAGAATGGGCTTGGCAAGTTCATGAAAAGAACTGTATAAACGATCTGATAGATTCTAGACTATCAGAATTCAACACGGAAGAAGTTCAATGCCTTGTGAAAATAGCACTTTTGTGCACTCAGACATCACCAAATTTACGGCCATCAATGTCACGTGTAGTGGCAATGCTTTCAGGAGATATTGAAGTGAGTGCTGTAACATCAAGGCCCGGATACTTGACTGACTGGAAATTTGACGATGTTAGCAGCATCATGACTGATATTTCAACGAAGGGATTGGATTCAAGTTATTACAATTCATCAGCAAGTCCCAGCAGAGTTGGTGGTGCATATATTCATTCACCAATTGATCCATCTAAATCCATCCTTGAGGAGACTGTTAGAGGTGAGCTTGATGAAAAAAGAATAATTCTTATGCAAGAAAGGAAAACATTCCTACTGTCTTTTCATTTCTGGTCTTCCTCAATGGCAATTCACATTTTATTAATTGCGTTAGCTAATTCGAGAAGCAAGCCTCTAACGACGACCATTCCGAGTCTTGGACTATTCTACAAGAAGATGGTTGGATACTTGAGTTTTGATTCATCTGAAATCAAGATTCTAGTCGATAAACTTGATAAAGTTCAAATGCCACGTTCATCAAAAGCTGTCGTTGAACAGCTTGAGGGTCCTCAACAAGTGATCAAGAATCTAGAAGCAATGGCCGCAAGCTCCAAACAAGGAGAACGTTTGCTTTATTTCTTTTGGGGACACGAAAATGGCGGTGGTATAGATTTTGGCCCCATGAATCCAACGATAACTGGTCGGCTGGAATACCCAAAATTTATTCCAAAACAGCATCCTAAAGATATTTTTCCACCCCCAGCTGTGGCAAGGGTGCTCGCCAAATCGCCTTTAATGCGACATATAGCCGATTGCAAAGAGACATTTCTCTTGATTGATGAGCGACCATATGTTTCCAAGTTGAAATCCATTGATAGAGGTCTAACCGATCCAAGCATTGCTCTCGGAATACTTGTCACACTTAGAGAAACACAACGTTTATGTCATTTTTTAGGAGCTTGCGGAGAAGTTGTTCAGAGAGCATGTAAGGAAATTGGTTGA 3855 0.3961 MVLYIGIGVRGFMMRPCILGSALVIALCVFSNLFNFAQAQVQPQILNATTDPYEAGVINSIFSKWNKSADTTQWNISGEICSGNAIDSTTTIDDLTYNPFIKCDCSFNNKTICRITALKVYAIDVIGEIPPELWTLTHLTNLNLAQNYLTGSLPPAIGNLTRMQYMTFGINALSGELPKELGNLTQLISLSFGNNKLSGSLPSELGKLVKLEQLYMDSSGLSGPMPRTIASLKNLGIVWASDNKFTGRIPDFIGNWSKLQVLRFQGNSFEGPIPSSFSNLTSLTELRVSGLSNDSSSLNVIRNMKSLTILELRNNNISGSIPSTIGELQNLTQLDLSFNKISGKIPGSIFNLRSLVSLFLGNNTLSGTLPRQKSSILKNIDLSYNDLSGSLPSWINEPKLQLNIVANNFTIVSSNISGLPTGFNCLQKNFPCNRGAARYFDFGIKCGGPQIRTTDGIVYQADNETLGPATYFVTDTSRWAVSNVGLFTGNNNPLYKSFVSNQFTHTVNSEIFQTARLSPSSLRYYGLGLENGFYNITLQFAETAILDSITTWKSLGRRVFDIYIQGTRVLKDFDIQREAGGVSYRAVQKQFRSEVKENYLEVHLFWAGKGTCCIPSQGTYGPLIQAINAIPDFIPTVSNKPPSTKKNRAGLIIGVVVGVGAVFFLAVFAIFYIVRRKQYDDDDELLGIDTMPNTFTYYELKNATSDFNRDNKLGEGGFGPVYKGTLNDGRIVAVKQLSIGSHQGKSQFVAEIATISAVQHRNLVKLYGCCIEGSKRLLVYEYLENKSLDQALFGNVLCLNWSTRYDICMGVARGLTYLHEESRLRIVHRDVKASNILLDSELVPKISDFGLAKLYDDKKTHISTRVAGTIGYLAPEYAMRGHLTEKADVFSFGVVALELVSGRPNSDSSLEGEKMYLLEWAWQVHEKNCINDLIDSRLSEFNTEEVQCLVKIALLCTQTSPNLRPSMSRVVAMLSGDIEVSAVTSRPGYLTDWKFDDVSSIMTDISTKGLDSSYYNSSASPSRVGGAYIHSPIDPSKSILEETVRGELDEKRIILMQERKTFLLSFHFWSSSMAIHILLIALANSRSKPLTTTIPSLGLFYKKMVGYLSFDSSEIKILVDKLDKVQMPRSSKAVVEQLEGPQQVIKNLEAMAASSKQGERLLYFFWGHENGGGIDFGPMNPTITGRLEYPKFIPKQHPKDIFPPPAVARVLAKSPLMRHIADCKETFLLIDERPYVSKLKSIDRGLTDPSIALGILVTLRETQRLCHFLGACGEVVQRACKEIG 1284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01631 1284 FunFam Leucine-rich repeat receptor-like protein kinase 676 782 - -
Trre6g01631 1284 SUPERFAMILY L domain-like 112 414 - -
Trre6g01631 1284 FunFam Leucine-rich repeat receptor-like protein kinase 439 631 - -
Trre6g01631 1284 Pfam Malectin domain 442 627 IPR021720 -
Trre6g01631 1284 Gene3D Transferase(Phosphotransferase) domain 1 783 985 - -
Trre6g01631 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 29 1002 - -
Trre6g01631 1284 SMART LRR_typ_2 136 160 IPR003591 -
Trre6g01631 1284 SMART LRR_typ_2 184 208 IPR003591 -
Trre6g01631 1284 SMART LRR_typ_2 328 352 IPR003591 -
Trre6g01631 1284 SMART LRR_typ_2 304 327 IPR003591 -
Trre6g01631 1284 Gene3D Ribonuclease Inhibitor 56 294 IPR032675 -
Trre6g01631 1284 FunFam Leucine-rich repeat transmembrane protein kinase 52 293 - -
Trre6g01631 1284 Gene3D Ribonuclease Inhibitor 295 417 IPR032675 -
Trre6g01631 1284 Pfam Protein tyrosine and serine/threonine kinase 710 974 IPR001245 GO:0004672|GO:0006468
Trre6g01631 1284 SMART serkin_6 707 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01631 1284 FunFam Putative LRR receptor-like serine/threonine-protein kinase 783 986 - -
Trre6g01631 1284 Pfam Leucine rich repeat 306 365 IPR001611 GO:0005515
Trre6g01631 1284 FunFam Putative LRR receptor-like serine/threonine-protein kinase 294 417 - -
Trre6g01631 1284 SUPERFAMILY Protein kinase-like (PK-like) 690 995 IPR011009 -
Trre6g01631 1284 Gene3D - 442 631 - -
Trre6g01631 1284 Gene3D Phosphorylase Kinase; domain 1 678 782 - -
Trre6g01631 1284 ProSiteProfiles Leucine-rich repeat profile. 330 352 IPR001611 GO:0005515
Trre6g01631 1284 CDD STKc_IRAK 713 974 - -
Trre6g01631 1284 ProSiteProfiles Protein kinase domain profile. 707 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01631 1284 ProSitePatterns Serine/Threonine protein kinases active-site signature. 826 838 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01631 Trre-Chr6 13488667 13508476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01631 120 294 Receptor kinase-like Gene Family AT1G56120 25.143 1.67e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g01631 PK_Tyr_Ser-Thr 1.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01631 - - mtr:25502389 1655.19