Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01630 ATGGATAACAGTATAGTTGATGGTGTTAATGAAATTGAAATTGAAAGTATTGCGGAGACCGAGACTGGGATTGAGAGCAAAAATTGTAGCTGTAGTAGAGAAACTGAAGATGAGAATGAATTGGAAGAAGGTGAAATAGTATATTCTGATGTGAGTGTTAATGATGACAGTGAAGATGATTCAGAGGATATTACTAATTGGGCCATTCATGATGATGAATCTCGACGAAGATCTGATAGGTCAAGAAACGACTTTGAGATACGAGAGTATCATATGAAGCACCCAGTTGCACGTGTTGTTGATGCTAATGACGATTTTGAAGCCCTGCTTAAAGAGGAACCTCAAATTGAGTATGTCAATTCTAAATTGGAGAGCCCATCGAGTACTCTGCATACCTTGATAGATGTTCTGAAACAGATAAGCTCCCAATCCAAACTTCTTTGA 444 0.3806 MDNSIVDGVNEIEIESIAETETGIESKNCSCSRETEDENELEEGEIVYSDVSVNDDSEDDSEDITNWAIHDDESRRRSDRSRNDFEIREYHMKHPVARVVDANDDFEALLKEEPQIEYVNSKLESPSSTLHTLIDVLKQISSQSKLL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01630 147 MobiDBLite consensus disorder prediction 63 83 - -
Trre6g01630 147 MobiDBLite consensus disorder prediction 17 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01630 Trre-Chr6 13478068 13479264 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01630 86 118 C2H2 Transcription Factor Family AT5G06160 66.667 4.10e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01630 K12827 - qsu:112017984 66.6254