Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01618 ATGGCTATCCTTCCTTTCATACTCGTTATTACTAAGCTACTTTTATTATTCTTCTTCAAAATTTCCTTTGCAACAGATACCATTACACAATCACAGTCACTTCCAGATGGAAGCACCTTGGTTTCTAAGGGTGGAATATTTGAGTTGGGTTTCTTCAATCTTGGTGATTCCACAAACCGCTATGTTGGAATCTGGTACAAAAATATCCCTATTAGAAGAGTTGTTTGGGTCGCTAACCGTGACAACCCGATTAAAGATAATTCTAGCAAGTTAGTCATAAGTCATGATGGAAACCTTGTGCTTCTCAATGAGAATCATTCTCTTCTATGGTCAACAAACTCATCAACAACAAAAGTTTCAAATTCCATTCCATTTGTGCAACTCTTGGACGATGGAAATTTCGTACTAAAAAATGAGAAGCAGACCGGCGACGAACATTTTCTATGGCAGAGTTTTGATCATCCATGTGACACAATATTGCCAGGAATGAAGATTGGATGGGATAAAAAAAGGGGTTTTGATAGGCGTCTCACGGCATGGAAAAATTGGAATGACCCATCTTCTGGTGAGCTTACTTTATTTATGGTATTAACTCCTAATCCTGAAGCCTTTATTTCAAAAGGCTCGACAAAACTCTATAGGACAGGACCATGGACTGGTCGTCGATCAAGTGGAATAATTGGATTGAAAGAAAATCCACTTTATAATTATGAATTTCTCAGTAATGAAGATGAAATATATTATATGTTTACACTCAAAAATAGCACCGTGGTTTCTATAATTGTTTTTAACGAAACCCTTTCTGTTCGTCAACGCCTTGTTTGGATTCAAGAATCCAAAACATGGAATGTTTACCAAACCTTACCCCAAGATAATTGTGATAAATACAATGTTTGTGGAGCAAATGGACTATGTGTGCTTGATGCATCACCTATGTGTCAATGTTTCAAGGGATTTAAGCCAAAATCACCACAACAGTGGAGTGCAACAGATTGGACACAAGGATGTGTGCGCATTGGTAATTGGAGTTGTGAGGCCAAAGTCAATGATGGATTCGAAAGAATTCCTGGAATGAAATTGCCAGATACTGCACATTCTTGGATCGATGAGAAAATGACATTAGAAAATTGCAAGGCTAAATGTTTGGAAAATTGTTCATGCAGTGCTTACTCAAGTTTAGACGCGACTGGAGTAGGTAATGGTTGTTCTATCTGGTTTGGTGATCTATTTGACCTTCGAGTCTCACCTACTGGACAAGACCTGTATATTCGAAGGGAAGCTTCAAATATCGGTAAAAATGGGCATACTAAAACGGTAGTATTAGCAGTTTCAATTACAGTTCCAACAATCCTTGTGATGTTATTGGCATTCACCTACATGTATGTAACAAAGGCAAAGTATAAAAGAGAGAAAGATGAAGACACACATGAAGATTTTGAACTACCTTTCTTTGATCGAGCTACAATATTGAAGGCAACAAAAAATTTCTCTCTTGATAATAAGCTCGGTGAAGGTGGTTTTGGATTGGTATACAAGGGTACATTGCTTAATGGACAAGAAATTGCTGTCAAAAGACTTTTAATGAGTTCAAGTCAAGGATTAAAGGAGTTTAAAAATGAAGTTATGTTATGTGCTAAACTTCAACACCGGAATCTTGTTAAAGTTGTCGGTTTTTGTATTGAAAGAGAGGAGAAAATGTTGATTTATGAATACATGTCCAACAAAAGTCTTGATTCATTTCTTTTTGATTTTGGGATAGCTAGAATATGTGGAAATGATCAAATTGAAGGGAACACAAACAAAATAGTTGGCACATACGGTTACATGGCACCTGAATATGCTATTGATGAATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGTGTATTATTATTAGAAATTATCAACGGAAGGAAAAATAGAGCACATAACTACCAAGAACACGATCAAAATCTTATTGGATATGCTTGGAGATTGTGGAAAGAAGGCACTCCTCTCAAATTGATTGATGATTATATAAAGGAATCATGTATTGAATCTGAAGCATTACGTTGCATTCAAATTGGTCTATTATGCCTACAACATCATCCTGATGATCGGCCAAGCATGACATCCGTTATTTTGATGTTGAGTAGCGAAAGTACTTTATCTTATAATCTAAAGGAACCCAGTTTCTTAATTAAAAAGTTAACAGCTGAAGGAGAATCTTCTTCTTCACAATGTTAG 2229 0.3603 MAILPFILVITKLLLLFFFKISFATDTITQSQSLPDGSTLVSKGGIFELGFFNLGDSTNRYVGIWYKNIPIRRVVWVANRDNPIKDNSSKLVISHDGNLVLLNENHSLLWSTNSSTTKVSNSIPFVQLLDDGNFVLKNEKQTGDEHFLWQSFDHPCDTILPGMKIGWDKKRGFDRRLTAWKNWNDPSSGELTLFMVLTPNPEAFISKGSTKLYRTGPWTGRRSSGIIGLKENPLYNYEFLSNEDEIYYMFTLKNSTVVSIIVFNETLSVRQRLVWIQESKTWNVYQTLPQDNCDKYNVCGANGLCVLDASPMCQCFKGFKPKSPQQWSATDWTQGCVRIGNWSCEAKVNDGFERIPGMKLPDTAHSWIDEKMTLENCKAKCLENCSCSAYSSLDATGVGNGCSIWFGDLFDLRVSPTGQDLYIRREASNIGKNGHTKTVVLAVSITVPTILVMLLAFTYMYVTKAKYKREKDEDTHEDFELPFFDRATILKATKNFSLDNKLGEGGFGLVYKGTLLNGQEIAVKRLLMSSSQGLKEFKNEVMLCAKLQHRNLVKVVGFCIEREEKMLIYEYMSNKSLDSFLFDFGIARICGNDQIEGNTNKIVGTYGYMAPEYAIDELFSIKSDVFSFGVLLLEIINGRKNRAHNYQEHDQNLIGYAWRLWKEGTPLKLIDDYIKESCIESEALRCIQIGLLCLQHHPDDRPSMTSVILMLSSESTLSYNLKEPSFLIKKLTAEGESSSSQC 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01618 742 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 186 IPR036426 -
Trre6g01618 742 ProSitePatterns Protein kinases ATP-binding region signature. 502 524 IPR017441 GO:0005524
Trre6g01618 742 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Trre6g01618 742 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Trre6g01618 742 ProSiteProfiles Protein kinase domain profile. 390 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01618 742 Gene3D Phosphorylase Kinase; domain 1 458 571 - -
Trre6g01618 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 571 - -
Trre6g01618 742 Gene3D Hepatocyte Growth Factor 343 422 - -
Trre6g01618 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 152 - -
Trre6g01618 742 CDD PAN_AP_plant 343 424 - -
Trre6g01618 742 Pfam Protein tyrosine and serine/threonine kinase 497 581 IPR001245 GO:0004672|GO:0006468
Trre6g01618 742 Pfam Protein tyrosine and serine/threonine kinase 583 708 IPR001245 GO:0004672|GO:0006468
Trre6g01618 742 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 591 716 - -
Trre6g01618 742 Pfam PAN-like domain 344 412 IPR003609 -
Trre6g01618 742 PIRSF SRK 1 583 IPR024171 GO:0004674
Trre6g01618 742 PIRSF SRK 583 742 IPR024171 GO:0004674
Trre6g01618 742 Gene3D Transferase(Phosphotransferase) domain 1 572 709 - -
Trre6g01618 742 SMART ntp_6 347 425 IPR003609 -
Trre6g01618 742 Pfam S-locus glycoprotein domain 213 323 IPR000858 GO:0048544
Trre6g01618 742 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 702 - -
Trre6g01618 742 SMART blect_4 31 155 IPR001480 -
Trre6g01618 742 Pfam D-mannose binding lectin 74 181 IPR001480 -
Trre6g01618 742 Gene3D - 20 152 IPR036426 -
Trre6g01618 742 SUPERFAMILY Protein kinase-like (PK-like) 479 720 IPR011009 -
Trre6g01618 742 ProSiteProfiles Bulb-type lectin domain profile. 25 149 IPR001480 -
Trre6g01618 742 CDD B_lectin 31 155 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01618 Trre-Chr6 13401569 13404431 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01618 472 741 Receptor kinase-like Gene Family AT4G23150 43.558 5.62e-80 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g01618 PK_Tyr_Ser-Thr 4.8e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01618 - - tpra:123915292 1112.06