Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01613 ATGAATATTCTTCCTACCATACTAGTTATTGGTAACATACTATTTTTCTTCTCCAAAATTTCTTGTGCAACTGATACCATTACACAATCACAACCACTTCTCGATGGAAGCACCTTGATTTCTAAGGGTGAAGTATTCGAACTGGGTTTCTTTAATCCTGGAAATTCCAACAACCGTTATGTTGGAATTTGGTACAAAAATATCCCTGATAGAAGAGTTGTTTGGGTTGCCAACCGTGACAATCCAATAAAAGACAATTCTGGTAAGTTGATCATAAGTCAAGGTCGATTTCTTGCGCTTGTCGATAAGAATCAATCTCTTTTATGGTCAACAAACACAACAACAAAGGTTTCAAATCCAATTGTGCAACTCTTGGATAATGGAAATTTAGTACTTAAAAATGATGGTGAAGAAAATTTTCTATGGCAAAGTTTTGATCATCCTTGTGATACAATATTATCCGAGATGAAGGTTGGATGGGACAAAAAAAGAGGTCTTGCTAGGAATCTCACTGCATGGAAAAATTGGGATGATCCATCTTCAGGTGAATTTATTTCAGCTATGATTCTAACTCCTAATCCTGAAAGCTTTATATTTGAAGGCTCAACAAAAATCTTTAGGACAGGACCATGGACCGGTTCACGGTCTAGTGGAGTAACTAGTGGAATAATTGGATTTCAAGAAAATCCACTTTTTGATTATGAATTTGTCAACAATGAAAATGAGGTATATTATAAGTTTACACTCAAAAATAGTTCTGTTGTTTCTATAATTGTTATGAATCAATCACTTTCTCTTCGTCAACGACTTGTTTGGATTCCAGAATCCAAAACATGGGGTGTTTATTCAAAATTACCACAAGATAGTTGTGATGCTTACAATGTTTGCGGGGCAAATGGGCAATGTGTACTTGATGCATCGCCCATGTGCCAATGTTTAGATGGATTTAAGCCGAAATCACCACAACAATGGAATGGAATGGACTGGAGAGGAGGATGTGTGCGTAATGGTAATTGGAGTTGTGGAGTTAAAAAGAGAGACGGGTTTAAAAAAATTGTTGGGATGAAATTGCCGGATACTACACATTCTTGGATTGGTGAAAAAATGACACTCGAAGATTGTAAGGCTAAATGCTTGAAAAATTGTTCGTGTAGTGCTTACTCAAGTTTAGACTCAACTAGAATAGATGGTGGTTGTTCTCTTTGGTTTGGTGATCTTATTGATTTGAGAGTTTTACAAAGAGGAAACGAAGTATATGTTCGAGTAGATGCTTCGGATATCGGAGATGGAAATGGGCACAAAAAAATGGTAGAATTGGTGGTATCAACTACAGTTCCAGTAGTCTTTGTGATTTTAATGGCATTCACCTACATTTATATCAAAAAGGCAAAATATAAAGAGAAAATAGAGAAAATCACAAGGTTGGAAGAGAAAGATGAAGACACGCATGAAGATTTTGAGCTTCCTATTTATGATCAAGCTACCATACTCAAGGCAACAAATAACTTCTCTTTCAACAATAAGCTGGGTGAAGGTGGTTTTGGACCGGTATACAAGGGTATATTGCTTGATGGACAAGAAATTGCTGTCAAAAGGCTATCAAAGAGTTCTGGACAAGGATCAAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAACTTCAACATCGAAATCTTGTTAAGGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCGAATAAAAGCCTCGATTCATTTCTTTTTGATTTTGGCTTGGCTAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACAAAATAGTTGGCACATACGGTTATATGGCTCCAGAATATGCCATTGATGGACTATTCTCTATAAAATCAGATGTCTTTAGCTTTGGTGTACTATTATTGGAAATAATTAGCGGAAAGAAAAATAGAGCACGGAGCTACCGAGAACACGATCATAATCTTATTGGATATGCATGGAGATTATGGAAAGAGGGAATTCCACTCAAATTGGTTGATGATAATATAAGGGACTCATGCATTGAATTTGAAGCAATACGTTGTATTCAAATTGCTCTACTATGCGTACAACATCATCCAGATGATAGACCAAACATGACATCTGTAGTTGTGATGTTAAATAGCGAAAGTAGTCTACCTATACCAAAGGAACCCGGTTTCTTGATTAAAATGTTCTCAACTGAAGGAGAACCTTCTTCTGGAAAAGAAACATCTTCAACAAATGAAGTAACTATATCACTATTAGAGGCTAGATAG 2292 0.3591 MNILPTILVIGNILFFFSKISCATDTITQSQPLLDGSTLISKGEVFELGFFNPGNSNNRYVGIWYKNIPDRRVVWVANRDNPIKDNSGKLIISQGRFLALVDKNQSLLWSTNTTTKVSNPIVQLLDNGNLVLKNDGEENFLWQSFDHPCDTILSEMKVGWDKKRGLARNLTAWKNWDDPSSGEFISAMILTPNPESFIFEGSTKIFRTGPWTGSRSSGVTSGIIGFQENPLFDYEFVNNENEVYYKFTLKNSSVVSIIVMNQSLSLRQRLVWIPESKTWGVYSKLPQDSCDAYNVCGANGQCVLDASPMCQCLDGFKPKSPQQWNGMDWRGGCVRNGNWSCGVKKRDGFKKIVGMKLPDTTHSWIGEKMTLEDCKAKCLKNCSCSAYSSLDSTRIDGGCSLWFGDLIDLRVLQRGNEVYVRVDASDIGDGNGHKKMVELVVSTTVPVVFVILMAFTYIYIKKAKYKEKIEKITRLEEKDEDTHEDFELPIYDQATILKATNNFSFNNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSKEFKNEVILCAKLQHRNLVKVVGCCIEGDEKMLIYEYMSNKSLDSFLFDFGLARMCGGDQIEGRTNKIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNRARSYREHDHNLIGYAWRLWKEGIPLKLVDDNIRDSCIEFEAIRCIQIALLCVQHHPDDRPNMTSVVVMLNSESSLPIPKEPGFLIKMFSTEGEPSSGKETSSTNEVTISLLEAR 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01613 763 ProSiteProfiles Protein kinase domain profile. 503 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01613 763 CDD B_lectin 30 148 IPR001480 -
Trre6g01613 763 Gene3D Hepatocyte Growth Factor 340 423 - -
Trre6g01613 763 Gene3D Phosphorylase Kinase; domain 1 462 574 - -
Trre6g01613 763 MobiDBLite consensus disorder prediction 742 763 - -
Trre6g01613 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 468 578 - -
Trre6g01613 763 Pfam Protein tyrosine and serine/threonine kinase 590 717 IPR001245 GO:0004672|GO:0006468
Trre6g01613 763 Pfam Protein tyrosine and serine/threonine kinase 504 588 IPR001245 GO:0004672|GO:0006468
Trre6g01613 763 Pfam Domain of unknown function (DUF3403) 720 763 IPR021820 GO:0004674
Trre6g01613 763 SMART ntp_6 344 422 IPR003609 -
Trre6g01613 763 ProSiteProfiles PAN/Apple domain profile. 341 424 IPR003609 -
Trre6g01613 763 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Trre6g01613 763 Gene3D Transferase(Phosphotransferase) domain 1 575 722 - -
Trre6g01613 763 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Trre6g01613 763 SMART blect_4 30 148 IPR001480 -
Trre6g01613 763 Pfam PAN-like domain 341 409 IPR003609 -
Trre6g01613 763 CDD EGF_CA 288 320 - -
Trre6g01613 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 145 - -
Trre6g01613 763 Pfam S-locus glycoprotein domain 206 320 IPR000858 GO:0048544
Trre6g01613 763 SUPERFAMILY Protein kinase-like (PK-like) 486 727 IPR011009 -
Trre6g01613 763 CDD PAN_AP_plant 340 422 - -
Trre6g01613 763 Gene3D - 18 145 IPR036426 -
Trre6g01613 763 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 709 - -
Trre6g01613 763 MobiDBLite consensus disorder prediction 740 763 - -
Trre6g01613 763 PIRSF SRK 1 590 IPR024171 GO:0004674
Trre6g01613 763 PIRSF SRK 590 763 IPR024171 GO:0004674
Trre6g01613 763 Pfam D-mannose binding lectin 73 174 IPR001480 -
Trre6g01613 763 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 179 IPR036426 -
Trre6g01613 763 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 598 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01613 Trre-Chr6 13381356 13384882 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01613 450 759 Receptor kinase-like Gene Family AT4G23150 42.391 2.32e-81 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g01613 PK_Tyr_Ser-Thr 5.7e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01613 - - tpra:123915292 1343.95