Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01610 ATGAACACTTTTCCTACCATACTCATTATTGCTAACTTACTATTATTCTTCTTCTCCAAAATTTCTTCTGCAACAGATACCATTACACAATCACAATCACTTACCGATGGAAGCACCTTGGTTTCTAAGGGTGAAGTATTCGAGCTGGGTTTCTTTAATCCTGGTAATTCCAACAACCGCTATGTTGGAATTTGGTACAAAAATATTCCTGTTAGAAGAGTTGTTTGGGTTGCCAACCGTGACAACCCAATAAAAGACAATTCTAGCAAGTTGATCATAAGTCAAGATCGATTTCTTGCACTTGTCGATAAGAATCAATCTCTTTTATGGTCAACAAACACAACAACAAAAGTTTCAAATCCGATTGTGCAACTCTTGGATAACGGAAATTTAGTACTTAAAAATGATGGCGAAGAAAATTTTCTATGGCAGAGTTTTGATTATCCTTGTGATACAATATTACCCGAGATGAAGGTTGGATGGGACAAAAAAAGAGGTATTGATTGGCGTCTTACTGCGTGGAAAAATTGGGATGATCCATCTCCAGGTGAGTTTACTTCGGCTATGATTCTAACTCCTAATCCCGAAAGCTTTATTTGGAAAGGTTTAACAAAACTCTATAGGACAGGACCATGGACAGGTCCTCGAACTAGCGGAATAATTGGATTGACACAAAATCCACTTTATAATTATGATTTTCTCAATAATGAAAATGAAGTGTATTATATGTTCACTCTTAAGAATAGTTCTGCGATTTCAATAATTGTTTTTAACCAAACAATTTCTCTTCGTCAACGCCTCGTTTGGATTCCAGAATCCAAAATATGGAGTGTTTACCAAACCTTACCACAAGATAGTTGTGATGTATACAATGTTTGTGGGGCAAATGGGCATTGTGTGCTTGATGCATCACCTATGTGTCAGTGTTTAGATGGGTTTAAACCAAAATCACCGCAACAGTGGAATGCAACAGATTGGAGACAAGGATGTGTGCGTAATGGTAATTGGAGCTGTGGAGTCAAAAATAGAGATGGATTTAAGAGAATTACTCAGATGAAATTGCCGGATACTACACATTCTTGGATTGACGAGAAAATGACACTTGAAGATTGCAAGGCTAAATGTTTCGAAAATTGTTCGTGTAGTGCTTACTCAAGTTTAGACTCAACTGGAGCAGGTAGTGGTTGTTCTATTTGGTTTGGTGATCTTGTTGATCTGAGAGTTTTACAAAGCGGAAATGATCTATATATTCGAGTTGACGCCTCAAACACTGGTGATAAAAATGGACATACCAAAACTATAATATTGGCAATATCTATCACAATTTCACTAGTCCTTGTGATGATATTGTTGGCATTTACCTCCATTTATATAACAAAGGCAAAGCGTAAAGAGAAAATAGAGAAAATCATAAGGTTGGAAGAGAAAGATGAAGACACAAATGAAGATTTTGAGCTTCCTATCTTTGATCAAGTTACAATACTTAAGGCAACAAATAACTTCTCTTTTGACAATAAGCTCGGTGAAGGTGGTTTCGGACCTGTATATAAGGGTATATTGCTTGATGGACAGGAAATTGCTGTCAAAAGACTTTCAAAGAGTTCCGGACAAGGATCAAAAGAGTTTAAAAATGAAGTTATATTATGTGCTAAGCTTCAACATCGAAATCTTGTTAAAGTTGTTGGTTGTTGTATTGAAGGAGATGAGAAAATGTTGATCTATGAATACATGTCGAATAATAGTCTCGACTCAATTCTTTTTGATTTTGGCTTGGCCAGAATGTGTGGAGGTGATCAAATTGAAGGGAGAACAAACAGAATAGTTGGCACATATGGTTATATGGCTCCAGAATATGCTATTGATGGATTATTCTCTATAAAATCAGATGTATTTAGCTTTGGAGTATTATTATTAGAAATTATCAGCGGAAAGAAAAATAGAGAAATTAGCCATCAAGAACATGATCATAATCTTATTGGATATGCATGGAGATTGTGGAAAGAGGGAATGCCAATCAAATTGATTGATGATAATATAAGGGACTCATGCATTGAGTCTGAAGCATTACGTTGCATTCAAACTGGTCTACTATGCCTACAACATCATCCTGATGATAGACCAAACATGCCATCTGTGGTTGTGATGTTAAGTAGTGAAAATACTCTACCTGAACCAAAGGAACCTGGTTTCTTAATTAACAAGTGTAGACCTGAAGGAGAATCTTCTTCTGCAAGACAAACATCTTCGACAAATGAAATAACTATTTCGTTATTAGACGCTAGATAG 2286 0.36 MNTFPTILIIANLLLFFFSKISSATDTITQSQSLTDGSTLVSKGEVFELGFFNPGNSNNRYVGIWYKNIPVRRVVWVANRDNPIKDNSSKLIISQDRFLALVDKNQSLLWSTNTTTKVSNPIVQLLDNGNLVLKNDGEENFLWQSFDYPCDTILPEMKVGWDKKRGIDWRLTAWKNWDDPSPGEFTSAMILTPNPESFIWKGLTKLYRTGPWTGPRTSGIIGLTQNPLYNYDFLNNENEVYYMFTLKNSSAISIIVFNQTISLRQRLVWIPESKIWSVYQTLPQDSCDVYNVCGANGHCVLDASPMCQCLDGFKPKSPQQWNATDWRQGCVRNGNWSCGVKNRDGFKRITQMKLPDTTHSWIDEKMTLEDCKAKCFENCSCSAYSSLDSTGAGSGCSIWFGDLVDLRVLQSGNDLYIRVDASNTGDKNGHTKTIILAISITISLVLVMILLAFTSIYITKAKRKEKIEKIIRLEEKDEDTNEDFELPIFDQVTILKATNNFSFDNKLGEGGFGPVYKGILLDGQEIAVKRLSKSSGQGSKEFKNEVILCAKLQHRNLVKVVGCCIEGDEKMLIYEYMSNNSLDSILFDFGLARMCGGDQIEGRTNRIVGTYGYMAPEYAIDGLFSIKSDVFSFGVLLLEIISGKKNREISHQEHDHNLIGYAWRLWKEGMPIKLIDDNIRDSCIESEALRCIQTGLLCLQHHPDDRPNMPSVVVMLSSENTLPEPKEPGFLINKCRPEGESSSARQTSSTNEITISLLDAR 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01610 761 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 707 - -
Trre6g01610 761 ProSiteProfiles Protein kinase domain profile. 384 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01610 761 ProSiteProfiles Bulb-type lectin domain profile. 25 146 IPR001480 -
Trre6g01610 761 PIRSF SRK 1 588 IPR024171 GO:0004674
Trre6g01610 761 PIRSF SRK 588 761 IPR024171 GO:0004674
Trre6g01610 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 596 721 - -
Trre6g01610 761 Pfam Domain of unknown function (DUF3403) 717 761 IPR021820 GO:0004674
Trre6g01610 761 Pfam D-mannose binding lectin 74 175 IPR001480 -
Trre6g01610 761 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Trre6g01610 761 CDD B_lectin 31 149 IPR001480 -
Trre6g01610 761 Pfam Protein tyrosine and serine/threonine kinase 588 714 IPR001245 GO:0004672|GO:0006468
Trre6g01610 761 Pfam Protein tyrosine and serine/threonine kinase 502 586 IPR001245 GO:0004672|GO:0006468
Trre6g01610 761 Gene3D Transferase(Phosphotransferase) domain 1 573 720 - -
Trre6g01610 761 Gene3D - 19 146 IPR036426 -
Trre6g01610 761 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 180 IPR036426 -
Trre6g01610 761 MobiDBLite consensus disorder prediction 739 761 - -
Trre6g01610 761 SMART blect_4 31 149 IPR001480 -
Trre6g01610 761 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Trre6g01610 761 MobiDBLite consensus disorder prediction 737 761 - -
Trre6g01610 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 146 - -
Trre6g01610 761 SUPERFAMILY Protein kinase-like (PK-like) 483 729 IPR011009 -
Trre6g01610 761 Gene3D Hepatocyte Growth Factor 337 418 - -
Trre6g01610 761 CDD PAN_AP_plant 337 419 - -
Trre6g01610 761 Pfam PAN-like domain 338 406 IPR003609 -
Trre6g01610 761 CDD EGF_CA 285 317 - -
Trre6g01610 761 Gene3D Phosphorylase Kinase; domain 1 459 572 - -
Trre6g01610 761 SMART ntp_6 341 419 IPR003609 -
Trre6g01610 761 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 466 576 - -
Trre6g01610 761 Pfam S-locus glycoprotein domain 207 317 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01610 Trre-Chr6 13363793 13367578 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01610 427 730 Receptor kinase-like Gene Family AT4G23230 43.767 6.60e-82 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trre6g01610 PK_Tyr_Ser-Thr 4.9e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01610 - - tpra:123915292 1238.79