Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01520 ATGGATGATAATTTCATTGTGAGTGTGACAAATGAAGAGGTTGTGGCTGCAGTATTACCAATACAAGAACATTGGCTCCCACTCTCTAATCTTGACTTACTTCTACCTAAAGTAGATGTTGGAGTGTTCTTTTGTTACAAGAATCCTATGTTGTTATCCACTTCTACAACATTATTAACCTTTGAATCTATGGTTGTGTCTCTTAAGAAGGCATTAGCTAAGGTTTTGGTCTCTTACTATGCCTTTGCAGGTGAAGTTGTGTCCAATTCTGTAGGTGAACCTGAGCTTCTTTGTAATAACCGTGGGGTTGATTTTGTTGAAGCTGTGGCTGATATTGAGCTTCAATGCATTAACTTTTATAATCCTGATGAATCTGTTGAAGGAAAGCTTGTTCCAAAGAAGAAGTACGGTGTGCTCGCTGTTCAGGTAACTTCTTTAAAATGTGGTGGGATAGTAGTGGCATGCACATTTGATCATCGCATAGCAGATGCCTATTCAGCAAACATGTTTCTAGTATCATGGGCCGAGATGGCACACTCAACAAAGCCCATCAAGCCCATAACAACCACAAACAAACCATGTTTCCGTCGCTCCCTCCTTAGCCCCCGCCATCTCGGTTCTATCCACCCTTCTCTCGATGACATGTATATTCCTATTTCCAAACTTCCCCCTCCTTCAGCCACGACTACCAAGCCACTACTTAGTCGAATATACCACGTCACTGCAGAGGAACTCCAACGCTTGCAATCATTTGCCGCTTCAACTAATGATGGCAACACCAATCCTACAAAACTCGAATCTTTCTCTGCCTACTTGTGGAAGTTGGTTGCTCATGCGGCTACGAGGGATGCTAGCAAAATGGTCATTGCTAAAATGGGTATAGTGGTTGATGGAAGGAAGAGACTTGGCAAGGATAGTATTGACGAGAAAGGGAAAGAAGCAATGATGGAACGATATTTTGGGAATGTTCTTTCTATACCCTTTGGTGGGAAACCGGCGGAGGAGTTGGTGGATAAGCCATTAGGGTGGGTGGTTGATGTGGTCCGTGAGTTTGTGTCGGTAGCAACAACGGAGGAGCACTTTTTGGGGCTCATCGATTGGGTCGAAGAGATTCGACCTATCCCTGGATTGGCGAAAATTTATTGTGGTTGCCCCAATGAGGGACCAACTTTTGTGGTGTCTTCCGGACAAAGATTTCCGGAAGACAAGGTTAATTTTGGGTGGGGGAAAGTTGTGTTTGCATCGTACCATTTTCCTTGGGGTGGTGAAGCTGGTTATGTGATGCCAATGCCAAGCCCTTTAAGGAATGGTGATTGGATTGTTTACATGCACCTTTTGAAAGAGCAGTTGGAGATCATAGAGTCCGAGGCAGATCATGTCTTTAGACCTATAACTTGGGATTATCTCTACCAATGA 1416 0.4386 MDDNFIVSVTNEEVVAAVLPIQEHWLPLSNLDLLLPKVDVGVFFCYKNPMLLSTSTTLLTFESMVVSLKKALAKVLVSYYAFAGEVVSNSVGEPELLCNNRGVDFVEAVADIELQCINFYNPDESVEGKLVPKKKYGVLAVQVTSLKCGGIVVACTFDHRIADAYSANMFLVSWAEMAHSTKPIKPITTTNKPCFRRSLLSPRHLGSIHPSLDDMYIPISKLPPPSATTTKPLLSRIYHVTAEELQRLQSFAASTNDGNTNPTKLESFSAYLWKLVAHAATRDASKMVIAKMGIVVDGRKRLGKDSIDEKGKEAMMERYFGNVLSIPFGGKPAEELVDKPLGWVVDVVREFVSVATTEEHFLGLIDWVEEIRPIPGLAKIYCGCPNEGPTFVVSSGQRFPEDKVNFGWGKVVFASYHFPWGGEAGYVMPMPSPLRNGDWIVYMHLLKEQLEIIESEADHVFRPITWDYLYQ 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01520 471 Gene3D - 6 213 IPR023213 -
Trre6g01520 471 Gene3D - 218 456 IPR023213 -
Trre6g01520 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 19 432 - -
Trre6g01520 471 Pfam Transferase family 7 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01520 Trre-Chr6 12408463 12412983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01520 16 454 Monolignol Biosynthesis Gene Families AT5G48930 27.430 5.81e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01520 - - tpra:123917257 870.922