Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01491 ATGTTGTTGTTTTGTGATTCAATGTTAAAATTCAATCTCTTTCATGTTTACACTCATAATGTTACTGTTCATTGCCGCAATGATATTTCTAATAATTTATCTGTTTCCAACACAAATCAAGATGATTCATTTAAGCTAACCAGTATCTTAAATTCATCTGGGTTGTCCCCTGAAAAAGCCCTTAAACTCACAAATAGGTTGAAACTTAGAAAATATGATGATGGCCCAAATGCTGTAATTCAACTTTTCAGAAACTATGGCTTCTCTGATTCCCAAATATCAACCCTTGTTAAGAAACACCCTTTAGTGCTTTTATCAAACCCTGAAAAGACCCTTTTGCCTAAACTCAACTTTTTGCAATCCATTGGGGTTTCAACCACTGATCTCCCCAAAGTCTTAATTGGGAATACTTCTTTTTTAGCAACAAGTTTGGAGAAAAACACTATACCTCGTTATCACATTATTAGGAGCATTGTTCGTGATGATAAAAAGGTAGTTTCGGTTTTTAGGCGTTGGACATGGAACTTGTACAGTGATTCCTTGGTTCCAAACATTGAGGTTTTGAGGAAGCTTGGTGTTCCTCAAAGTTCTGTGCCCATTTTGGTATCTAATTTTCCCAATGTAGCATTCAGCGACCATTCTAGATTTGTTGAGGCTGTTAATTTAGTAAAGGAAATGGGATTCGATCCTTTGAAGTCGAATTTTGTTATGGCACTTAACACAATTGTATTGATGGACAAAGAGACATGGGAATCAAAATTGAAGAATTTTGAGAGGTGGGGATGGTCGAAAGATATCTGTCTTTTGGCGTTCCAAAAGTATCCTCAGTTTATGATGGTGTCAGAAAAAAAGATTACGAAAATAATGAATTTCTTGGTGAACGATATGGGTCTTACCCCAGAAGACATTGCTAGAATGCCTGGGATTCTAATGTGCAGCTTCGAGAAGACAATTGTTCCTAGATGTGAAGTTATTAACATTTTGAAGTCAAGGGGTTTGATAAAGAGTGATTTGCTCATAGGTACCTTTATTACCATAAGTGAGAAAATATTTTTGGCGAGATATGTTACCCGATTTCAGAAAGATTTGCCACTCTTATTGGATGTATATAAAGGTCTGAAGTCAGATTGA 1131 0.359 MLLFCDSMLKFNLFHVYTHNVTVHCRNDISNNLSVSNTNQDDSFKLTSILNSSGLSPEKALKLTNRLKLRKYDDGPNAVIQLFRNYGFSDSQISTLVKKHPLVLLSNPEKTLLPKLNFLQSIGVSTTDLPKVLIGNTSFLATSLEKNTIPRYHIIRSIVRDDKKVVSVFRRWTWNLYSDSLVPNIEVLRKLGVPQSSVPILVSNFPNVAFSDHSRFVEAVNLVKEMGFDPLKSNFVMALNTIVLMDKETWESKLKNFERWGWSKDICLLAFQKYPQFMMVSEKKITKIMNFLVNDMGLTPEDIARMPGILMCSFEKTIVPRCEVINILKSRGLIKSDLLIGTFITISEKIFLARYVTRFQKDLPLLLDVYKGLKSD 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01491 376 SMART mt_12 268 299 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 300 334 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 199 229 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 166 194 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 SMART mt_12 233 263 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 Gene3D Transcription termination factor 3, mitochondrial 140 363 IPR038538 -
Trre6g01491 376 FunFam Mitochondrial transcription termination factor-like 144 363 - -
Trre6g01491 376 Pfam mTERF 80 229 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 Pfam mTERF 241 351 IPR003690 GO:0003690|GO:0006355
Trre6g01491 376 PANTHER CGI-12 PROTEIN-RELATED 49 358 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01491 Trre-Chr6 12093949 12095079 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Trre6g01491 mTERF 8.1e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01491 K15032 - gmx:106799612 405.601