Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01436 ATGACAACAATTAAAGCTTCTTACACTGTGAAACCAAGTGAATCAACTCCAAAGGGTCGTTTATGGCTCTCAGATTTAGATCAAATTAAACTACTTGTGCGTCTCAGTCACTCACCACTTATTTTCATTTACAAACCAAATCAGAACACACAAAACAGAACAATAATTGAAACCTTAAAAACCTCTCTCAGCAAAATTCTTGTTCACTACTATCCTATAGCCGGTCGTTATTGTTACGAAGAAGGTGGTCGATTAGAATTGAATCTCAATGCAAAAGGTGCTGTTTTGATTGAAGCTGAAACCACTAAAACAATTCATGAATATGGTGACTTTTCACCTTCTGACTCCACCAAAGAGCTTATGCCAATAATTGATTATAATCAACCAATTGATGAAATTCCATTGTTTGTTGCTCAAGTAACAAGATTTCAAAACAAAGATGAAAGCTTTGGATTTGCAATAGGAGTTGCTTACTCACACAATTTATCTGATGGAGTTGGTTGTTTCCAATTGTTGAACTCATGGGCCAAAATTTCAAGAGGCGAAACACTTGAGGCTAATGAGTTACCATTTTTAGATAGAACAATTCTCAAATTTTCACACACCCCAATTGAGCCGCGTTTCGAACACATAGAGTTGAAGCCGTTGCCACTCATTCTAGGAAGATCTGACAATGATATAGAAAGAAAGAAGAAAATAACAGCTGAAATGTTGAAACTCACAAAAGAACAAGTTGAAAAGTTGCAGAAAAAGGCTAATGAAGGAAATATTCCAAAAGGGTCAAGAACTTATAGTAGATTTGAAGCAATTACTGCACATATTTGGAAAAGTGCTTCGAAGACACGCGAGCTTAGTGCGAATCAACAAAGTGTAGTTAGGTTCAATGTTGAATTCAGGAATAGAATAATTCCATATCTTCCTAAGAATTATTATGGGAATGCTTTGAGCCAAACAGCAGCAACAAGTTACATTGGTGAAATCAAATCCAAGCCATTGAGTTATGTTGCAGAAAGAATAAGGGAAGCAAAAGAGTTGATAACAAATGAGTATATAAGGTCACAAATAGATGTTGTTAGAGGATTTCAACATTTGGATGATGCAAGGAAATTGTTTTCATATTATGTTGGGAATCCTAATCTTCTGATAACAAGTTGGATGACTATGCCTGCATATGAAGCTGATTTTGGGTGGGGAAAGCCTATTCATTTTGGTTTAGGGACTGTGAGTCCATATGATAGGGGTTTGCTTCTTATGAGTCCTGATGGTGATGGTTCTGTTATTGTTTGTATGCATTTTCAGGTTGAACTTATGCAGCTTTTCAAGAAGTTCTTCTATGGTGATTTATATGAGTTGTTCTCATCAGCTAGATTGTGA 1374 0.3588 MTTIKASYTVKPSESTPKGRLWLSDLDQIKLLVRLSHSPLIFIYKPNQNTQNRTIIETLKTSLSKILVHYYPIAGRYCYEEGGRLELNLNAKGAVLIEAETTKTIHEYGDFSPSDSTKELMPIIDYNQPIDEIPLFVAQVTRFQNKDESFGFAIGVAYSHNLSDGVGCFQLLNSWAKISRGETLEANELPFLDRTILKFSHTPIEPRFEHIELKPLPLILGRSDNDIERKKKITAEMLKLTKEQVEKLQKKANEGNIPKGSRTYSRFEAITAHIWKSASKTRELSANQQSVVRFNVEFRNRIIPYLPKNYYGNALSQTAATSYIGEIKSKPLSYVAERIREAKELITNEYIRSQIDVVRGFQHLDDARKLFSYYVGNPNLLITSWMTMPAYEADFGWGKPIHFGLGTVSPYDRGLLLMSPDGDGSVIVCMHFQVELMQLFKKFFYGDLYELFSSARL 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01436 457 Gene3D - 2 215 IPR023213 -
Trre6g01436 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 9 442 - -
Trre6g01436 457 Gene3D - 222 446 IPR023213 -
Trre6g01436 457 Pfam Transferase family 3 444 - -
Trre6g01436 457 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01436 Trre-Chr6 11509747 11511120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01436 4 445 Monolignol Biosynthesis Gene Families AT5G48930 33.784 9.54e-88 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01436 K13065 - gmx:100778626 541.191