Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01427 ATGATTTCATCATTGAGACAACCTAGTATTGCGATCAGTGGTTCTGATGTTGTTTTTGGGAAAAGACATGCAACCCTAATTCAACCACAGTCTTTTTTACCATCTTTGATTAGTGCAAAATCACATAGATCTGTTGTTTCATTGAAAAGGCCTCTTCATATTGCATGTCTTGGTGTTGGAAATTTTGGGTCAGTGAAGAATTTTGAGACAGAGAAGAGTTTTGAAAAGGGTGATTTGGTTAAGTGTGGTGCTTATGAAGCTGATAGATCAGAGGTTGAAGATGCAGGAACACCATCAGAAGCTGCAAAAAAAGTGAAAATTGGAATATATTTTGCAACTTGGTGGGCTTTGAATGTTGTTTTCAATATTTATAACAAGAAGGTTTTGAATGCTTACCCTTACCCTTGGCTCACATCAACTCTGTCATTAGCTTGTGGCTCACTTATGATGTTGATTTCTTGGGGCACTAGGATAGCAGAAGCTCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTTCCTGTTGCTGTTGCGCACACAATTGGACATGTAGCGGCTACGGTTAGTATGTCCAAAGTTGCAGTATCATTTACACATATCATCAAGAGTGGTGAGCCTGCTTTTAGTGTTCTGGTTTCGAGATTTATTTTGGGCGAAACCTTCCCCGTGCCAGTTTATCTGTCTTTACTTCCAATCATTGGTGGATGTGCACTTGCTGCTGTGACTGAGCTCAATTTCAATATGATCGGTTTTATGGGGGCTATGATATCAAATTTGGCATTTGTGTTCAGGAACATCTTTTCGAAAAAGGGGATGAAGGGAAAATCTGTTAGCGGAATGAATTACTATGCTTGTTTATCTATTTTGTCCCTTGCAATTCTCACACCCTTTGCAATTGCCGTGGAAGGACCAGCTGCATGGGCTGCTGGATATCAAACAGCTATGGCTGAAATTGGACCACAATTCCTTTGGTGGGTAGCAGCTCAAAGTATATTCTATCATCTATACAATCAAGTGTCTTACATGTCGTTGGATGAGATCTCTCCCTTGACATTTAGCATTGGAAACACCATGAAACGTATATCTGTCATAGTATCTTCAATTATCATCTTCCACACACCAGTTCAACCCGTCAATGCTCTTGGAGCCGCAATTGCTATCTTCGGGACCTTCCTTTACTCACAGGCAAAACAATAG 1197 0.4027 MISSLRQPSIAISGSDVVFGKRHATLIQPQSFLPSLISAKSHRSVVSLKRPLHIACLGVGNFGSVKNFETEKSFEKGDLVKCGAYEADRSEVEDAGTPSEAAKKVKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWGTRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFILGETFPVPVYLSLLPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGKSVSGMNYYACLSILSLAILTPFAIAVEGPAAWAAGYQTAMAEIGPQFLWWVAAQSIFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAIFGTFLYSQAKQ 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01427 398 PANTHER SOLUTE CARRIER FAMILY 35 106 397 - -
Trre6g01427 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 297 395 - -
Trre6g01427 398 Pfam Triose-phosphate Transporter family 106 394 IPR004853 -
Trre6g01427 398 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 106 397 IPR004696 GO:0016020|GO:0022857|GO:0055085
Trre6g01427 398 SUPERFAMILY Multidrug resistance efflux transporter EmrE 157 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01427 Trre-Chr6 11443609 11447510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01427 32 398 Antiporters AT1G61800 77.600 0.0 563
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01427 K15283 - gmx:732659 664.07