Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01368 ATGAGAGAAGACGATTCAAATTGGTTTTCAAGATGGGAAGAACAACTCCCTTCACCTGATGAACTCATGCCTTTATCACAAACCCAAATCACCCCTGATCTTGCCATAGCTTTTGACATCAGAAACAACATCAACAATAACACACACAACACAATCAACAACATTAACCACACAAACCCACAACAACAACAACAATTGGTGTTAATGTTACCTTCTACGAGCCAGCTAACAATCGGTGCAATTAACGGCGCAACTAACAATCACCTCGTTTTCTTCTACGAGCCTTTCACTGTTACTGCTTTCTCTGATTCAGTTCAAATCGGTAACGGATCGTTGCCGGCGTTTAATTCTGATAAGAATAACCAAACAAGTCTCCGGTCAGTGCTTTCGAATTCACAAGATCTGGATACGGAATCGTTGACTAGTTTGAGATCGGGTTTGAAGAGAAAGAAAGGTTTTCCGGTGGTGATTCAGATGGATACGAAGGTGAAGATGAAGATGGAATGGTTGAAGAGTAAGAAGGTTGGAATAAGAGTGACGTGTGAAGGAATTAGAGGAACTGTTCCCGCAGGTAAGTTGTCGTCGGTGGCTTCTGTAATCGATTCGGAATGTAAGGTGGATCTTCGAATCAAGATCTGGAAATTCTCCTTTTAG 654 0.4174 MREDDSNWFSRWEEQLPSPDELMPLSQTQITPDLAIAFDIRNNINNNTHNTINNINHTNPQQQQQLVLMLPSTSQLTIGAINGATNNHLVFFYEPFTVTAFSDSVQIGNGSLPAFNSDKNNQTSLRSVLSNSQDLDTESLTSLRSGLKRKKGFPVVIQMDTKVKMKMEWLKSKKVGIRVTCEGIRGTVPAGKLSSVASVIDSECKVDLRIKIWKFSF 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01368 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 67 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01368 Trre-Chr6 10711608 10712261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01368 1 48 G2-like Transcription Factor Family AT5G05090 70.833 2.95e-11 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01368 - - tpra:123894238 249.98