Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01358 ATGAGTGTGGTAGGGTTTGACATTGGTAATGAGAACTGTGTCATTGCTGTGGCAAAGCATCGTGGGATCGATGTTTTGTTGAATGATGAATCCAAACGGGAAACTCCTGCTGTTGTCTGTTTTGGCGAGAAGCAGCGGTTTTTAGGGTCTGCTGGTTCTGCTTCTGCTATGATGCACCCGAAATCAACAATATCTCAAGTCAAGAGATTTATAGGCAGGAAATTTTGTGACCCTGATATGGAAAGGGATCTGAAAATGCTCCCTCTTGAAACTTCTGAAGGCCCAGACAGTGGTGTTTTGATTCATTTGAAGTATATGGAGGGGACTCATACGTTTACGCCGGTTCAAATAATGTCTATGCTTTTTGCTCACTTGAAGACTATGACGGAAAAGGATTTGGAGGCACCCATCTCGGATTGTGTTATTGGTATCCCATCATACTTCACCGATTTGCAGAGGCGAGCATATCTTGATGCGGCAAAAATTGCTGGGTTGAAGCCTTTGAGATTGATACATGATTGTACTGCAACTGCCCTTAGTTATGGAATTTACAAAACAAATTTTCAAAATGATGGTTCAACTTATGTTGCATTTATTGACATTGGTCACTGTGATACTCAAGTATGCATTGCAGCATTCGAGTTCGGACAAATGAAGATACTTTCACATGCTTTTGATAGGAGCTTAGGGGGGAGGGACTTTGATGAGGTTCTATTTACTCATTTTGCTGAAAAATTCAAGGAACAGTACAGCATTGACGTTTTTTCTAACGCCAAGGCATGTATTAGGCTCCGTGCAGCATGTGAGAAACTGAAGAAAGTTTTGAGTGCGAATCCAGAGGCACCGCTAAATATTGAGTGTTTGATGGATGAGAAAGATGTTAAGGGCTTTATCACAAGAGAAGAATTTGAGAATCTCGCAGCGGGATTATTGGAGAGAATTTCTGAACCATGCAATAAAGCATTAGCGGATGCTGGCTTGGTTGCAGAGAAGATTGCTTCTGTCGAGCTAGTTGGTTCAGGTTCTAGGATTCCAGCAGTAAGTACATTATTATCTTCTTTATTCAAGAGAGAACCCAGCCGAAAGCTGAATGCAAGTGAGTGTGTAGCTCGTGGTTGTGCTCTACAATGTGCTATGCTCAGTCCCACATATCGTGTGAGAGAATATGAGGTCCAGGATATTAGTCCTTTTTCATATGGACTTTCATCAGATGAAGGTCCAAATGGTGTAATTTTCCCAAAAGGCCAACCCATTCCAAGCACTGCAATCCTAGGACTCCAGCGAACTAATTTGTTCCATTTGGAAGCTTTCTATGCAAATCCAAAAGAACTACCACCTGGAACAGTTCCCAAAATTAGTTCCTTCACGATTGGTCCTTTGCTTGGATCTCAAGGTAGTAAGACAAGAGTTAAAGTTCGAGTTCAACTAAATCTACATGGCATTTTCAGTATTGATTTAGCTAAAATGATCAAGGATCATGCGGACGATCATCATTCAAATTTTGATGCAATGGATGTTGATCCCGTGCCTGAGACATCAGATAGTACCAATTTTGTTGCCAATGGCGCTGAAGATAGTACCAATAAGTGTGATCCTCCACAAAACTCTGCTGATCATTCAAGAAAAGATAAAGCTAACAAATGGATTACTATTCCAGTGAATGAGGATATCTATGATGGAATGACAACGGCAGAAATTTCTGAAGCTCATGATAAAGAACTCCAGTTAGCCCAACAGGACAGAGCTGTGGAGCTAACCAAAGAAAAGAAGAACACCTTGGAGTCCTATGTCTATGAGACGAGGAGTAAGCTCTTCAACACTTATCGGAACTTTGCAAGTGAGCCAGAGAGGAATGACATATCTAGGAGTTTGCAAGAGACTGAGGATTGGCTTTATGAGGATGGTGATGATGAAACCGAACACGCTTATACCTCAAAATTGGAAGATCTGAAAAAGCTGGTGGATCCAATTGAGAATCGGTACAAAGATGACGAAGAAAGAGAGCAAGCTATAAAAAAATTATCAACACTCATTTCAGAGATTCACAAGTATTCAGATTCCCTTCCTCTTCAGTATAAAGAATCGCTCATCAATGACTGTAATAACGTAGAGCAGTGGCTAAAAGAGAAAGTGCAACAACAAAATTCTTATCCTAAGAATATTGATCCGATATTATGGTCAAGTGATATTAAGGGAGCATCAGAGCATCTCCAAAAAATAGTGCAAAGGATAGAAAGATCTAGGACAACTTCAGAAGACAATGACAATGACAATGACAATGACAAAGACAATGACAAAGACAAAGACAAGATGGATAGTTCCAATCATTCATGA 2334 0.404 MSVVGFDIGNENCVIAVAKHRGIDVLLNDESKRETPAVVCFGEKQRFLGSAGSASAMMHPKSTISQVKRFIGRKFCDPDMERDLKMLPLETSEGPDSGVLIHLKYMEGTHTFTPVQIMSMLFAHLKTMTEKDLEAPISDCVIGIPSYFTDLQRRAYLDAAKIAGLKPLRLIHDCTATALSYGIYKTNFQNDGSTYVAFIDIGHCDTQVCIAAFEFGQMKILSHAFDRSLGGRDFDEVLFTHFAEKFKEQYSIDVFSNAKACIRLRAACEKLKKVLSANPEAPLNIECLMDEKDVKGFITREEFENLAAGLLERISEPCNKALADAGLVAEKIASVELVGSGSRIPAVSTLLSSLFKREPSRKLNASECVARGCALQCAMLSPTYRVREYEVQDISPFSYGLSSDEGPNGVIFPKGQPIPSTAILGLQRTNLFHLEAFYANPKELPPGTVPKISSFTIGPLLGSQGSKTRVKVRVQLNLHGIFSIDLAKMIKDHADDHHSNFDAMDVDPVPETSDSTNFVANGAEDSTNKCDPPQNSADHSRKDKANKWITIPVNEDIYDGMTTAEISEAHDKELQLAQQDRAVELTKEKKNTLESYVYETRSKLFNTYRNFASEPERNDISRSLQETEDWLYEDGDDETEHAYTSKLEDLKKLVDPIENRYKDDEEREQAIKKLSTLISEIHKYSDSLPLQYKESLINDCNNVEQWLKEKVQQQNSYPKNIDPILWSSDIKGASEHLQKIVQRIERSRTTSEDNDNDNDNDKDNDKDKDKMDSSNHS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01358 777 MobiDBLite consensus disorder prediction 741 777 - -
Trre6g01358 777 Pfam Hsp70 protein 3 661 IPR013126 GO:0005524|GO:0140662
Trre6g01358 777 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Trre6g01358 777 Gene3D - 38 113 - -
Trre6g01358 777 Gene3D - 5 374 - -
Trre6g01358 777 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 563 661 IPR029048 -
Trre6g01358 777 MobiDBLite consensus disorder prediction 506 543 - -
Trre6g01358 777 Gene3D Actin; Chain A, domain 4 230 313 - -
Trre6g01358 777 SUPERFAMILY Actin-like ATPase domain 192 381 IPR043129 -
Trre6g01358 777 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 553 IPR029047 -
Trre6g01358 777 Gene3D - 561 673 IPR029048 -
Trre6g01358 777 FunFam Heat shock 70 kDa protein 4 561 671 - -
Trre6g01358 777 FunFam Heat shock 70 kDa protein 4 38 113 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 140 160 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 30 42 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 332 348 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 2 15 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 388 407 - -
Trre6g01358 777 PRINTS 70kDa heat shock protein signature 363 383 - -
Trre6g01358 777 FunFam Heat shock 70 kDa protein 4 108 193 - -
Trre6g01358 777 Coils Coil 647 667 - -
Trre6g01358 777 CDD HSPA4_like_NDB 2 381 - -
Trre6g01358 777 Gene3D - 186 360 - -
Trre6g01358 777 PANTHER HSC70CB, ISOFORM G-RELATED 1 766 - -
Trre6g01358 777 FunFam Heat shock 70 kDa protein 4 1 71 - -
Trre6g01358 777 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 385 594 IPR029047 -
Trre6g01358 777 MobiDBLite consensus disorder prediction 510 534 - -
Trre6g01358 777 FunFam Heat shock 70 kDa protein 4 230 313 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01358 Trre-Chr6 10649478 10655599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01358 4 657 Calmodulin-binding Proteins AT1G16030 27.844 8.85e-78 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01358 K09489 - gmx:100808218 1110.52