Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01356 ATGGCCACGTTAGCTAGTGTTGCTGTTCTCACTCTCACTCATTATTCAAAGTGTTTTTTCACTCACACTCACAGATTCAACCATTTCAACACAACAACAAGGCAATTTCTCTCTTCCAAAACACCACATCAACGACGTCGTTTATGCTACTACACTACCTCTACAACAACAAAGGTAATGGCTTCTTCAACAACTCCTTCAGATTCTGATGCAATCAATGCCCCTTATGGTTCTTGGAAATCACCCATCACTGCTGATGTTGTCTCCGGGGCATCTAAGAGACTTGGTGGTACTGCTGTTGATGGTCGTGGTCGTCTCATTTGGTTGGAATCACGTCCAACTGAATCAGGACGGGCAGTTCTTGTTCTTGAGCCGGAAAACCCAGGGGGTGAGGCTGTGGATATTACTCCAAAGGAGTTTGGAGTGAGAACATTGGCTCAGGAGTATGGTGGTGGTGCTTTCACTGTTTCAGGAGATGTTGTCTTTTTTGCAAATTACAAGGACCAGAGATTATACAAACAATCCATCACTTCTCTTGATGTGCCTCCTATACCTCTCACTCCGGATTATAGTGGACCGGTTGTAAGCTACGCAGATGGAGTATTGGATACACGCTTTAACCGTTTTATTGCTGTAAGGGAAGATCGTAGGGAGAGCAGTCAAAATCCACCTACAACTATTGTATCAATAGCACTTGGCAGTAAGGATGTTAAAGAACCAGAAGTACTAGTTGGTGGGAGTGACTTCTATGCTTTCCCACGTCTAGACCCTAAAAGTGAAAGAATAGCATGGATACAGTGGAGTCATCCCAACATGCCGTGGGATAAATCAGAACTTTGGGTTGGCTATATTTCTGAAAATGGAGAGATCTACAAGCGTGTTTGTGTAGCTGGGTATGATCCTTCAGTTGTGGAGTCTCCAACTGAGCCCAAGTGGTCTTCTGATGGTGAACTTTTTTTCATCACGGATAGGGAAAGTGGTTTTTGGAATCTTCATAAATGGATTGAGTCAGAAAATAAGGTTGTGCCTGTTTATTCTTTGGACGCCGAGTTTGCTAGGCCACTATGGATTTTTGGTAATAATTCTTATGAATTTGTGAAAAGTCCTAAACAGAGAAACTTAATTGCTTGCAGTTACAGGCAGAAGGGAAAGTCATATCTTGGAATTATTGATGATGCGCAGGGCTCAAACCTAACCGTGCTTGATATCCCGTTCACAGATATCGAAAACATTACTTCTGGTACTGGTTGTCTATTTCTCGAAGGGGCGTCTGTAGTTCTTCCATCATCAGTGGCCAAGGTGACTTTAGATGACAATAAATCAATAGTAGTCGACTTCAATATTATTTGGTCCTCCTCACCGGATAGTTTAAAATATAGTTCGTACATCAGTAAGCCAGAGCTGATTGAATTCCCAACTGAAGTTCCTGGTCAAAATGCTTATGCATACTTTTATCCACCTTCTAATCCTAAATACCAAGCCATTGAAGGAGAAAAGCCTCCGCTATTATTGAAGAGCCATGGAGGACCAACGGCTGAAGCACGTGGAGTTTTAAATTTGAGCATTCAGTACTGGACTAGTCGGGGTTGGGCATTCGCTGATGTTAATTACGGGGGAAGCACCGGTTATGGCAGGGAGTACAGGGATCGGCTTTTAGGACGCTGGGGAATAGTGGATGTCAATGACTGTTGTAGCTGTGCTACATATTTGGTGGACAGCGGAAAAGTTGACGGGGAGCGGCTGTGTATAACTGGGGGATCTGCTGGTGGATATACCACCTTAGCCGCACTCGCTTTTAAAGATACTTTTAAGGCTGGGGCTTCTTTGTATGGTGTAGCCGACTTGAAGTTATTGATAGAAGAAACTCATAAATTTGAATCTCACTACATTGATAATCTAATTAGAGGTGAGAAGGAGTGGTTCGAAAGATCCCCAATCAATCACGTTGATAAATTTTCTTGTCCCATTATTTTATTTCAAGGATTGGAGGACAAGGTTGTGCCGCCGAGTCAAGCTCGCAAAATTTACCAGGCTTTGAAGGAAAAAGGTGTGCCAGTTGCTCTTGTTGAGTATGAAGGAGAACAACATGGTTTCCGAAAGGCTGAGAACATTAAGTATACACTTGAACAACAAATGGTTTTCTTTGCGCGATTGATTGGACGCTTCAATGTTGCTGATGATATCACTCCCATCAAAATTGACAACTTCGATGGAGAATGA 2220 0.4279 MATLASVAVLTLTHYSKCFFTHTHRFNHFNTTTRQFLSSKTPHQRRRLCYYTTSTTTKVMASSTTPSDSDAINAPYGSWKSPITADVVSGASKRLGGTAVDGRGRLIWLESRPTESGRAVLVLEPENPGGEAVDITPKEFGVRTLAQEYGGGAFTVSGDVVFFANYKDQRLYKQSITSLDVPPIPLTPDYSGPVVSYADGVLDTRFNRFIAVREDRRESSQNPPTTIVSIALGSKDVKEPEVLVGGSDFYAFPRLDPKSERIAWIQWSHPNMPWDKSELWVGYISENGEIYKRVCVAGYDPSVVESPTEPKWSSDGELFFITDRESGFWNLHKWIESENKVVPVYSLDAEFARPLWIFGNNSYEFVKSPKQRNLIACSYRQKGKSYLGIIDDAQGSNLTVLDIPFTDIENITSGTGCLFLEGASVVLPSSVAKVTLDDNKSIVVDFNIIWSSSPDSLKYSSYISKPELIEFPTEVPGQNAYAYFYPPSNPKYQAIEGEKPPLLLKSHGGPTAEARGVLNLSIQYWTSRGWAFADVNYGGSTGYGREYRDRLLGRWGIVDVNDCCSCATYLVDSGKVDGERLCITGGSAGGYTTLAALAFKDTFKAGASLYGVADLKLLIEETHKFESHYIDNLIRGEKEWFERSPINHVDKFSCPIILFQGLEDKVVPPSQARKIYQALKEKGVPVALVEYEGEQHGFRKAENIKYTLEQQMVFFARLIGRFNVADDITPIKIDNFDGE 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01356 739 PANTHER PEPTIDASE S9 PROLYL OLIGOPEPTIDASE 72 732 - -
Trre6g01356 739 Pfam Prolyl oligopeptidase family 521 720 IPR001375 GO:0006508|GO:0008236
Trre6g01356 739 Gene3D alpha/beta hydrolase 458 725 IPR029058 -
Trre6g01356 739 SUPERFAMILY alpha/beta-Hydrolases 439 736 IPR029058 -
Trre6g01356 739 SUPERFAMILY Tricorn protease domain 2 119 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01356 Trre-Chr6 10639861 10646050 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01356 74 737 Carbohydrate Esterase AT5G36210 74.135 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01356 - - tpra:123917153 1437.55