Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01347 ATGGTTGAGTTGGAAATTCAGATTCCATCGACATTTGATCCATTCGCTGAAGCTAAAGAATCGGATGCAACTGGAGCGAAAGGTTATGTTCATATACGAATTCAACAAAGGAATGGAAAAAAGAGTTTAACAACTGTTCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAAGTTCTAAAAGATCTTAAGAAAGAATTTTGTTGTAACGGTAATGTTGTGCAGGATAAAGAGCTTGGCAAAATTATCCAACTTCAAGGTGATCAACGCAAGAACGTTTCACAGTTTTTGGTTAAGGCTGGTCTTGTGATGAAGGATCAGATTAAGATTCATGGTTTTTGA 339 0.3717 MVELEIQIPSTFDPFAEAKESDATGAKGYVHIRIQQRNGKKSLTTVQGLKKEFSYEKVLKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVKAGLVMKDQIKIHGF 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01347 112 Gene3D - 1 112 - -
Trre6g01347 112 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 8 112 - -
Trre6g01347 112 CDD eIF1_SUI1 28 111 IPR005874 GO:0003743
Trre6g01347 112 ProSiteProfiles Translation initiation factor SUI1 family profile. 30 100 IPR001950 GO:0003743|GO:0006413
Trre6g01347 112 NCBIfam translation initiation factor SUI1 5 112 IPR005874 GO:0003743
Trre6g01347 112 Pfam Translation initiation factor SUI1 27 100 IPR001950 GO:0003743|GO:0006413
Trre6g01347 112 SUPERFAMILY eIF1-like 4 112 IPR036877 GO:0003743|GO:0006413
Trre6g01347 112 PIRSF Transl_init_SUI1_Euk 1 112 IPR005874 GO:0003743
Trre6g01347 112 FunFam Eukaryotic translation initiation factor SUI1 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01347 Trre-Chr6 10512624 10512962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01347 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 83.929 7.62e-68 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01347 K03113 - cpap:110820651 206.068