Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01340 ATGACTGCTCTTCTTTTAATGGAGAGCAGTCATGTAATGGTAGCACCTTGGCTTAGTTTAAGTGTTCGTGTTTTGGTTAATGGTAATCCTTCTTTTGAGAAGGTTCATGGTGAAGATTTGTGGCGTTATACTGCTTCAAATCTTGATCATAATAATCAGGGCCGTGAGGTTTTTGATGGTGTTGGATCCTTGGTGGATGTCGGTGGAGGGAATGGTACCACCATGAGTTTTCTTGCTAAGGCTTTTCCTTGGATTCATGGAATTAATTTTGATCTTCCTCATGTCATCGACGTGGCGCCAAAGTATGATAAGGTGGAACATGTGGCAGGTGACATGTTTACAAGTGTTCCTAAAGCTGATGCTGTAATTATCAAGTGGGTTTTACATGATTGGGGGGATGATGAGTGCATCCAAATCTTGAAGAAATGTAGGGAAGCTATTCCAAAAGAAAAAGGAAAAGTTATTATTGTGGAAGCAGTTATTGAAGAAGAAGGAGGAAAACACAACAACTACAAAGATGTAGGATTAAAAAGGACACTACAAGAATGGACACACTAA 558 0.3961 MTALLLMESSHVMVAPWLSLSVRVLVNGNPSFEKVHGEDLWRYTASNLDHNNQGREVFDGVGSLVDVGGGNGTTMSFLAKAFPWIHGINFDLPHVIDVAPKYDKVEHVAGDMFTSVPKADAVIIKWVLHDWGDDECIQILKKCREAIPKEKGKVIIVEAVIEEEGGKHNNYKDVGLKRTLQEWTH 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01340 185 Gene3D Vaccinia Virus protein VP39 1 185 IPR029063 -
Trre6g01340 185 PANTHER O-METHYLTRANSFERASE 15 168 IPR016461 GO:0008168
Trre6g01340 185 CDD AdoMet_MTases 64 157 - -
Trre6g01340 185 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 183 IPR029063 -
Trre6g01340 185 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 185 IPR016461 GO:0008168
Trre6g01340 185 Pfam O-methyltransferase domain 58 170 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01340 Trre-Chr6 10411313 10415935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01340 1 163 Monolignol Biosynthesis Gene Families AT5G54160 40.884 1.21e-41 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01340 K22588 - gmx:100782951 211.846