Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01297 ATGATGGAGAAAGCAATGGTGGTGTTGAATAGTTTAGCAGGAATTGAAGAAGGTAAGGAAGCTATTGTTGAAGAAGGTGGAATAGCTGCTCTTGTTGAAGCCATTGAAGATGGGTCTGTGAAAGGAAAGGAATTTGCGGTTTTAACTCTTCTTCAGCTTTGTGCTGAGAGTGTTACAAACGGAGGGTTACTTGTTAGAGAAGGTGGAATTCCTCCTCTTGTAGCTCTTTCTCAGAATGGAACTCTTCGAGCTAAGCATAAGGCTGATACGCTCCTTCGATACTTGAGAGAATCAAGACAAGAAGCATCAACTTCGACCATAAAGCTTGTAACACTCTAG 339 0.4189 MMEKAMVVLNSLAGIEEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVTNGGLLVREGGIPPLVALSQNGTLRAKHKADTLLRYLRESRQEASTSTIKLVTL 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01297 112 Gene3D - 1 109 IPR011989 -
Trre6g01297 112 SUPERFAMILY ARM repeat 2 104 IPR016024 -
Trre6g01297 112 PANTHER U BOX DOMAIN-CONTAINING 1 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01297 Trre-Chr6 10057315 10058206 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01297 1 100 U-box Gene Family AT5G67340 56.000 2.74e-28 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01297 - - tpra:123898555 194.512