Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01296 ATGGGCAAGAGAGAGGTGGATGGTCTTGTACAAAGGAAGGAGACAGATATGAAGGCAATGGGAAAATTCGACGGCAATAGTCAACCGTTTTCTCGTGTTGTTTCGCTATCAGGTATTCAGTATGAATCATCTGAAAACTTCATTCCTTTTGGATCAAGACAAAAGGCTTATGATGAACTCTTTGAGGCACTCAATGATGACTCCATCCATATGATAGGATTGTCTGGAGACATTGGATCTGGAAAAACAACTCTTGTAACTGAAGTTGGCAAGCAGGCTGAGGATCAGAAAATGTTTGACAAGGTTATATCAATAACTGTGTCTCAAACTCCAGATATTAGAGGCATTCAAGGAGAAATTGCGGATATGTTAAAATTGAAACTGGAGGAAGAAAGTGAAAGGGGAAGAGCAGAACATTTATGGAAACATATAAAAGAAAAGCGAATTCTTATCATAGTAGACGATCTATGGACAGACTTTAATTTGAGCAAGGTAGGGATTCGCTTAGACAATCTTAACAAACAAACTTGGAAGATCCTCATAACCACTCATCTCGACCTTGTTTGTAGATTAAAGAAATGTCAAAAGAAGATTCAGTTGGAGCTCTTGTCTGATGACGAGTCTTGGCATTTATTCAAAACGTTTGCAGAAATTGATGACAAAGGCTCCGAGGAATTGAAGGGTGTGCCACGACAAATATGCAAAGAATGCAAAAGACTTCCCATAGCAATCAAAATTGTGGGGTCATTATTCAATGGCAGGAAGGAAATTAAGTGGCAGGAGGCGTTTAAGAAGTTAAGGGATTCAAAGGCTTCTGATGCTGAAAATAACTTTATTAATGGCGTTGAACTTAGCCATGATAAGTTGCCAACACCAAGAGCAAAACAAATCTTTCTATTGTGTTCTCTTTTTCCAGAAGAATATCACATCCTAAAAGAAGATTTGGTGAGGTATGTAGTTGGACTATGTTTGATAGAAATAAAGTCGTTACAGTCAATGAGGAACTCGTTCAACGAAGACTTAAAAGTAACTCTAGATTCTTGTTTGCTGACACGTGGTTCTGTGAAGATGCATAATATGGTTCGTGAAGCAGCCTTATGGATTTCAAATAGATCAGATGGTTGCAAAATCTTGGTAAATGTTGACAAACCACTTAGCACTGTGGCAGACGATAACAGATTAAGCGATTGTTTTGCAGTATCTTCATGGTGGTTTAATGAAAATCCCTCTTTTTGTCAATTGCATGCTCCAAATCTTAAAATGCTATTGGTAAATATAAATGCTCATATTTCAATGAATTCCTTGGATTTATCACCTTTAACATTTGAAGGAATACAAGGGCTTCAGGTATTCTCTCTAACCATCAATTACAAAATAGTACCAATATCATTTCCTCCATCAATCCAACTGTTGACAAATGTTCGAACTCTACGCTTAAATGGATTGAAGCTTGGTGACATTTCTGTCATAGTAAGCTTAACAACACTAGAGGTTCTTGACTTGCGACGCTGTTACTTCAACGAACTTCCTATTGCATTAAGAAACCTCAAAAGCCTGAAGCTGCTAGATTTGTCAGAATGTCATTTTTTTGAAAAAATCTATAACAGAGCTATAGGGAAATGTTCACAGCTAGAGGAGTTATATGCTTCAAAATGCTACCCAGATGAGTATCTTCAGGAAATCATTAGGGATATTTTTATTCTCCATAATCTACAAAGGTTTGTACTTGGTGATCCAATCATTCCAGCAAGAACTAGAGTTGTACAGATAAATCATTTTGATATCACAAGGTTGTGGACATCGACAACCAAAAAAAATATTATGCAAATAGCTGAGACAATTTCTTTGAAAGGCTTCCATGGAGGACGTGAAAATTTCATTCCAGAAATGGTTAGATTGTTTGGAGGCATGAATAATTTGTCTACTCTTCATCTTACTAATTATAGTGGGATAGAATGGATCTTTGATACAACTCGTGATTTAAAGGAAGATGATATGATTCCGAGGTTGGTTGAGTTACGCCTTAAATTAGTACGTCACTTGACAGAACTGTGTCATGGTCCACCTCTGCAAGTATTACACTTCTTTGAGAAACTAGAAGTACTTGACATTGATCAATGCCGGAAATTACACATCATATTTCCAAGGCAATGTAACTTGAGAAATCTCAAGCTCCTCAGCTTATCATATTGCAAGACCGATGAAGTACTCTTCTCAGAATCGATTGCTCAAAGTTTGCAGCAACTAGAACAGCTAACAATACATGGTTGCAGTGAATTGAAGCATATAATTTCTGCAAGTGAGGAAATAGTTCCAGCTCCAATGAACTCCCATTCTTTGATGACCAATATAAGGGATGTTAACATTTATGATTGTGAAAGATTAGAGTCGATATTTCCTCTTTGTTATGTCGAAGGAGTTTCACAATTGCAAAAGATGCATATATCACATTCTCGTAATCTGAAATATGTGTTTGGTAAATGTGATCACAAACACCTTTCATCATACCAAAAGCAGAACCATGTCATGCTGCCTCATTTGGAAGTTCTAAAACTGTTTTATCTTGAGAATCTGATTGGGATGTGTCCAGAGAATTATCGAGCAAATTGGCCGTCTCAGTCTCTGAGGATACTAGACATACAGGGATGTCCAAAACTGGCTTTACCATGGTTCAATTTGAATGCTGGCAACCAAAGCCAACATCATCTGAATGAAATTTGGAGTCTCCAATGTCTTGAGAGTTTAACATTGGGTGATTGTGAAGAATTGAAATGTTTGTTCTCCATGGAAACACATAGGAGCCTACCAGAGTTGATGTACCTCCGCGTTTACAATTGTGAAAAATTGGAACAAATTGTTGCAGCAAATGAAGAACTTGTGGACCTTCCTAATGATGAATTGTATTTTCCAAAGCTAGAACAAATAGAAGTTGAAAACTGCAACAAGCTGAAAAGTGTTTTCCCTTTTTTCATGGTTACAATGCTTCCACAATTAATCAGTCTTCGCTTATTAAAAGCAACTCAACTTCAAGAGGTTTTTAGACATGGTGAAGGAGACAACATTGTGAATAAAATGGAAATTGTTCTTCCAAACTTGACAGAAGTAACATTGGCCGATCTACCAAATTTTGAGTATATCTGCCATGGTTATAAGTTACATGCCATTGAGCTTCTACAATTCAACATATATAACTGCCCCAAATTTGCTCTAGGCTTAACAAAACTTCAGGGTAAATAG 3237 0.3695 MGKREVDGLVQRKETDMKAMGKFDGNSQPFSRVVSLSGIQYESSENFIPFGSRQKAYDELFEALNDDSIHMIGLSGDIGSGKTTLVTEVGKQAEDQKMFDKVISITVSQTPDIRGIQGEIADMLKLKLEEESERGRAEHLWKHIKEKRILIIVDDLWTDFNLSKVGIRLDNLNKQTWKILITTHLDLVCRLKKCQKKIQLELLSDDESWHLFKTFAEIDDKGSEELKGVPRQICKECKRLPIAIKIVGSLFNGRKEIKWQEAFKKLRDSKASDAENNFINGVELSHDKLPTPRAKQIFLLCSLFPEEYHILKEDLVRYVVGLCLIEIKSLQSMRNSFNEDLKVTLDSCLLTRGSVKMHNMVREAALWISNRSDGCKILVNVDKPLSTVADDNRLSDCFAVSSWWFNENPSFCQLHAPNLKMLLVNINAHISMNSLDLSPLTFEGIQGLQVFSLTINYKIVPISFPPSIQLLTNVRTLRLNGLKLGDISVIVSLTTLEVLDLRRCYFNELPIALRNLKSLKLLDLSECHFFEKIYNRAIGKCSQLEELYASKCYPDEYLQEIIRDIFILHNLQRFVLGDPIIPARTRVVQINHFDITRLWTSTTKKNIMQIAETISLKGFHGGRENFIPEMVRLFGGMNNLSTLHLTNYSGIEWIFDTTRDLKEDDMIPRLVELRLKLVRHLTELCHGPPLQVLHFFEKLEVLDIDQCRKLHIIFPRQCNLRNLKLLSLSYCKTDEVLFSESIAQSLQQLEQLTIHGCSELKHIISASEEIVPAPMNSHSLMTNIRDVNIYDCERLESIFPLCYVEGVSQLQKMHISHSRNLKYVFGKCDHKHLSSYQKQNHVMLPHLEVLKLFYLENLIGMCPENYRANWPSQSLRILDIQGCPKLALPWFNLNAGNQSQHHLNEIWSLQCLESLTLGDCEELKCLFSMETHRSLPELMYLRVYNCEKLEQIVAANEELVDLPNDELYFPKLEQIEVENCNKLKSVFPFFMVTMLPQLISLRLLKATQLQEVFRHGEGDNIVNKMEIVLPNLTEVTLADLPNFEYICHGYKLHAIELLQFNIYNCPKFALGLTKLQGK 1078
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01296 1078 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 808 1047 - -
Trre6g01296 1078 Gene3D Ribonuclease Inhibitor 896 1076 IPR032675 -
Trre6g01296 1078 Gene3D Ribonuclease Inhibitor 605 841 IPR032675 -
Trre6g01296 1078 SUPERFAMILY RNI-like 897 1066 - -
Trre6g01296 1078 Pfam NB-ARC domain 54 275 IPR002182 GO:0043531
Trre6g01296 1078 PRINTS Disease resistance protein signature 514 530 - -
Trre6g01296 1078 PRINTS Disease resistance protein signature 143 157 - -
Trre6g01296 1078 PRINTS Disease resistance protein signature 237 251 - -
Trre6g01296 1078 PRINTS Disease resistance protein signature 71 86 - -
Trre6g01296 1078 Gene3D - 202 289 IPR042197 -
Trre6g01296 1078 Gene3D - 40 200 IPR027417 -
Trre6g01296 1078 SUPERFAMILY L domain-like 356 860 - -
Trre6g01296 1078 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 301 IPR027417 -
Trre6g01296 1078 Gene3D Ribonuclease Inhibitor 425 591 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01296 Trre-Chr6 10031136 10035940 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01296 69 371 WRKY Transcription Factor Family AT5G45050 24.675 1.96e-09 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01296 - - tpra:123914509 1571.21