Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01217 ATGATAGCTACAAGATTGAATCAAGCAATTTACACATTATTAGTTGTTTGCAATCTCATCATTTCTGGTAGAGGAGTTGACTTCCCTTATGTAACTCGTTTGGTAAATCTCACTTATCTTCATCATGCTGTGAGACAAGGAGTAGTTTGTTTGGATGGAAGCCCGCCTGCATATCAATTTGACAAAGGATTTGGTGATGGGGTCAACAACTGGCTCATCTTTCTTGAGGGAGGAGGATGGTGTGACACAACTGAAGATTGCTTGAATAGAATCTTGCCCACTGGCATGGGTTCTTCGACCAACATGTTTCCAAAGAATTTCACGGGGATGACATCTAATGAACGATCACTTAATCCTTACTTCTACAACTGGAATAGAGTGTATGTTCATTATTGTGACGGATCTTCATTTACCGGTAACAATTTTGACCCTGTTCACAAACTTCATTATAAAGGAGCCAAGATTTTCAATGTAGTCGTAAAAGATTTACTAGCTAAAGGAATGAAGAATGCATCAAATGCACTTCTTTCGGGTTGTTCGGCGGGTGGATTAGCTGCAATCCTGAATTGTGATAAATTCCGGTCTCTCCTTTCTACCAGTACTCGTGTAAAATGTGTTTCTGATGCTGGTTACTTTCCCCACTTGAAAGATGTTTTAGGAGGATTCAGAGGGATGTTCATAAGTTCTTGCCTAATTCACTGTCAATACCATCTTCAACAAACTTGGAATGGGGTTGATCCCCGTTTTCGTCTTCATAACAAGGCAATGTCGGAGGCAGTAGGGAAATGGTTTGATGGTAAGGCTGAACTTCAGAGAATCGATCGTGAAAATGATTTGCCTAGAGTGTGCTTAACTTTGTGA 861 0.403 MIATRLNQAIYTLLVVCNLIISGRGVDFPYVTRLVNLTYLHHAVRQGVVCLDGSPPAYQFDKGFGDGVNNWLIFLEGGGWCDTTEDCLNRILPTGMGSSTNMFPKNFTGMTSNERSLNPYFYNWNRVYVHYCDGSSFTGNNFDPVHKLHYKGAKIFNVVVKDLLAKGMKNASNALLSGCSAGGLAAILNCDKFRSLLSTSTRVKCVSDAGYFPHLKDVLGGFRGMFISSCLIHCQYHLQQTWNGVDPRFRLHNKAMSEAVGKWFDGKAELQRIDRENDLPRVCLTL 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01217 286 Pfam Pectinacetylesterase 223 266 IPR004963 GO:0016787
Trre6g01217 286 Pfam Pectinacetylesterase 34 219 IPR004963 GO:0016787
Trre6g01217 286 PANTHER NOTUM-RELATED 223 276 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01217 Trre-Chr6 9378594 9380524 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01217 4 221 Carbohydrate Esterase AT5G45280 51.802 3.59e-75 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01217 K19882 - dcr:108207537 429.098