Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01204 ATGGCAGAAATTGCAGTGTCTTTGGTTGTGGAACAATTACTTCCACTGTTAAGGGAAGAAGCCAAGCTGTTGAGAGGTGTTCACAAGGAGTTTGCAGAGATTAAAGATGAACTTGAAAGCATCCAAGCCTTCCTTAAGGATGCAGATAAAAGAGCTGTTTCAGCTGAAGGTGAAGGAGTTAAAACATGGGTGAAGCAAGTTAGAGAAGTAGCTTTTCGCATAGAAGATATCATTGATGATTATTTGATCCATGTCGGACAAAAGCCTCGTGATCCTGGATGTGTAGCTTTAGTCTGTAAGATTAAAACTATGATCCCTCGTCATCGAATAGTGTCTGAGATTCAAGATATTAAGTCATCTGTACGCGGGATCAAGGAAAGAAGCGAAAGATATGGCTTTCAACGTTCTTTGGAACAAGGATCAAGCAAATGGCACGATCCTCGAGTGGCTGCTCTTTACATTGAGGAAGGTGAAGTTGTGGGCTATGAAATACAAAGAGAGAGGTTGATTGATTGGTTGATAAAGGGAAGAGATGATCGAACGGTAGTTTCCGTAGTAGGAATGGGAGGGCAAGGAAAAACAACTCTTGCCAAGAAAGTTTTTGACAGCAAGAATGTTATTGGACACTTTGATTGTCGTGTATGGATCACAGTATCTCAATCGTATAATGTCGAAGGGTTGTTGAGGGACATGTTACTAAAGTTTTACAAACAAAAAGGAGAAGATCCTCCTAAGGATATTTTTCAAATGGATCGAGGTTCGTTAATTGATGAAGTAAGAAACTACCTGCAGCAAAAGAGGTATGTTATCGTGTTTGATGATGTTTGGAGTGTACATTTTTGGGATGATATCGAATTTGCTATAATTGATAATAAAAATGGAAGTAAAATATTTATCACAACAAGGAACCTTGATGTTGTGGTATCTTGTAACAAATCTTCTTTCATTGAAGTGCTTGAGTTGCAACCATTAACTCAAGAACAATCTTTGGAGTTGTTCAATAAGAAGGCATTTAGATTTGACTATGGTGGGTGTTGTCCAAAGGAGCTCATTTCTATAGCTAATGAAATTGTTAAAAAATGTAAGGGTTTACCACTAGCAATTGTTGCAATTGGTGGTCTTTTGTCTGCAAAAGAGAAAAATGTGTTTGAGTGGCAAAGATTTAGTGAAAATCTAAGTTTTGAGCTAATAAAAAATACACATTTGATTGGGATAAAAGAAATATTAGGCTTAAGTTATGATGATTTGCCTTACTATCTCAAGTCATGCTTGTTGTATTTTGGAATATATCCAGAAGATTATCAAGTTAACTCAAAGAGAGTAATTCGACAATGGATCGCTGAAGGGTTTGTGAAGGAGGAAAGGGGGATGACTTTAGAAGAAGTTGCGAAAGGATATTTAACAGAGTTGATCAATAGAAGTTTGGTGCAAGTATCTTCCCTTAGATTTGACGGTAAAGCTAAAGGTTGTCGAGTTCATGATCTAATACGTGATATGATTCTTGAAAAATTTAAGGACTTAAATTTTTGCAAGCATATTAGTGAAGATGGAGAATCATCCTTAAGTGGAACAGTTCGACGCCTATCAATAACAACCACTTCCGATGATTTCATTGAGCATATTGAATGCTCACATGTTCGGTCAATACTTGTTTTTACAAATAAAAAATCAAATACCTCTGCGAAGAGAATTCCTACAAAATGTAAGTGGTTGAAGGTTCTTGATTATGAATCTACTCCATTATTTAACATTCCTGAGAAATTTGGAAATTTGATCCACTTAAAGTATTTAAGTTTGGGGTATATAACAGCAGGTAAAATTCCAAACTCCATTGGCATGCTCCAAAACCTAGAGACCTTGGATCTAAAGGCTACTAGTGTTACTGAGTTGCCAAAAGATACTTGCAAGCTAAGAAAGTTAAGACATCTTATCGGCTCTGGACTGTCATTGATTCAATTAAACAACGGTATTGGAGAGATGACATCTCTACAAACGCTGCATTATGTTAATTTAGGCATGGATGGTGCTGCTGTGGTAATTAAAGAGTTGGGAAAGCTGAAGAATATGCGTGAATTGGGGTTGCTTAATGTTTGTAGAGAAGATTACAACGTTCTATCATCTTCGATTAATGAAATGCATCACTTGGTGAAGTTACATGTTAAACTAAGTTCTCCAGGTAATGATGAATTCATTGATTTGAATTTGATTTCACCGCCAACTAGGCTTCGAAAACTTACACTACGTGGGAGGCTTCAGAAGTTGCCAGAGTGGATTTTAGAGCTTGAAAATCTTGTTGTGTTGAGGTTTAAGCTTTCATGTTTAACTAAAGATCCAATGCAATCTCTAAAAAGTTTGCAACATTTGTTGATCCTTTCTATAGGAGTTGGTGCTTATGGAGGTTCACATTTGTATTTTCAAGATGGATGGTTTCAGAAACTAAAGGAACTGGATATTGGATCTTCTGATGAACTGAGCGATATTATTATCGATAAAGGAGCGCTGTCTTCTTTGAAAAAACTTCAGTTATACGGACTCCCGAAACTGAAGAATATACCAACCGGCATCCAACACTTGGAGAAGCTTGAAGTTCTCCATATGAGGAGTATGCAAGTTGAATACTTGCAGCACAAGTCTCCTGAGGATTGGAATTGGATCATGGAGCATGTTCCCTTTGTAGAAATTTCTACCTCTGATGGAAATATTGTTCCAAACTCATAG 2718 0.3694 MAEIAVSLVVEQLLPLLREEAKLLRGVHKEFAEIKDELESIQAFLKDADKRAVSAEGEGVKTWVKQVREVAFRIEDIIDDYLIHVGQKPRDPGCVALVCKIKTMIPRHRIVSEIQDIKSSVRGIKERSERYGFQRSLEQGSSKWHDPRVAALYIEEGEVVGYEIQRERLIDWLIKGRDDRTVVSVVGMGGQGKTTLAKKVFDSKNVIGHFDCRVWITVSQSYNVEGLLRDMLLKFYKQKGEDPPKDIFQMDRGSLIDEVRNYLQQKRYVIVFDDVWSVHFWDDIEFAIIDNKNGSKIFITTRNLDVVVSCNKSSFIEVLELQPLTQEQSLELFNKKAFRFDYGGCCPKELISIANEIVKKCKGLPLAIVAIGGLLSAKEKNVFEWQRFSENLSFELIKNTHLIGIKEILGLSYDDLPYYLKSCLLYFGIYPEDYQVNSKRVIRQWIAEGFVKEERGMTLEEVAKGYLTELINRSLVQVSSLRFDGKAKGCRVHDLIRDMILEKFKDLNFCKHISEDGESSLSGTVRRLSITTTSDDFIEHIECSHVRSILVFTNKKSNTSAKRIPTKCKWLKVLDYESTPLFNIPEKFGNLIHLKYLSLGYITAGKIPNSIGMLQNLETLDLKATSVTELPKDTCKLRKLRHLIGSGLSLIQLNNGIGEMTSLQTLHYVNLGMDGAAVVIKELGKLKNMRELGLLNVCREDYNVLSSSINEMHHLVKLHVKLSSPGNDEFIDLNLISPPTRLRKLTLRGRLQKLPEWILELENLVVLRFKLSCLTKDPMQSLKSLQHLLILSIGVGAYGGSHLYFQDGWFQKLKELDIGSSDELSDIIIDKGALSSLKKLQLYGLPKLKNIPTGIQHLEKLEVLHMRSMQVEYLQHKSPEDWNWIMEHVPFVEISTSDGNIVPNS 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01204 905 CDD RX-CC_like 2 126 IPR038005 -
Trre6g01204 905 FunFam Probable disease resistance protein At1g63360 413 502 - -
Trre6g01204 905 Pfam NB-ARC domain 166 415 IPR002182 GO:0043531
Trre6g01204 905 Pfam Rx N-terminal domain 5 90 IPR041118 -
Trre6g01204 905 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 427 IPR027417 -
Trre6g01204 905 Gene3D Ribonuclease Inhibitor 534 887 IPR032675 -
Trre6g01204 905 PANTHER DISEASE RESISTANCE PROTEIN RP 33 837 IPR044974 GO:0006952
Trre6g01204 905 FunFam Probable disease resistance protein At1g61300 144 313 - -
Trre6g01204 905 SUPERFAMILY L domain-like 491 873 - -
Trre6g01204 905 Gene3D - 419 503 IPR036388 -
Trre6g01204 905 Gene3D - 323 417 IPR042197 -
Trre6g01204 905 Gene3D - 4 114 - -
Trre6g01204 905 Gene3D - 149 318 IPR027417 -
Trre6g01204 905 PRINTS Disease resistance protein signature 361 375 - -
Trre6g01204 905 PRINTS Disease resistance protein signature 262 276 - -
Trre6g01204 905 PRINTS Disease resistance protein signature 182 197 - -
Trre6g01204 905 PRINTS Disease resistance protein signature 612 628 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01204 Trre-Chr6 9279377 9282094 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01204 179 745 WRKY Transcription Factor Family AT5G45050 21.767 1.49e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01204 K13457 - gmx:100819372 973.77