Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01196 ATGGCAGAAATAGCAGTGTCTTTAGCCATTAACCATTTCATTCCACTGTTAACACAAGGAGTAAATTTTCTTGGAGGTGTTCCCAATGAATTGATAGACATTAAACATGAACTGGAAAGCATCCAAGGCTTCCTTAAGGAGGCTGATCGAAGAGCTGTAGCTGAAAGAGACAACATCAATGAAGGAGTCAAAATATGGGTGAAGCAAACTAGGGAAGCAGCCTTTCGTATAGAAGATATCATTGATCAATATATGATATATGTGGCACAACAGCCTCGTGATCCCGGATGTGTAGCTTTAATCCATAAGATTTCTCACATGATCAAAACATTAGCCCCTCGCCGCCGACTAGCATATGAGATTCAAGAAATTAAGTTATCTGTTTCTGAGATCAAGATAAGAAGAAGTAGATATGGCTTCGATTATGTTGACGAAACGTCAACTAGCTCTACAGTAAGTCAAGATGCCAAATGGCATGACCCAAGACGGGCTGCTCTTTACATGGAGGAAACTGAAGTAATAGGCTTTGAAGCACCAAGAGACAAATTGACTGATTGGTTGGTAAAGGGAAGAGAAGAGCGGACTGTCATATCTGTGGTGGGAATGGGAGGGCAGGGAAAAAGCATTCTTGCCAAGAAAGTTTTTGACAGCAAGGAGGTCATTGGACACTTTGAAGATTGTCGTGTATGGATCAAAGTTTCTCGATCATATACAGTAAAAAGAGTTTTGAGGGACATGCTGTTCAAGTTTAGATACACTCCTCTTCAGGATATCGCTACAATGGATCGAGAGTCATTGATTAATGAGGTGAGAAACTACTTGCAGCAAAAAAGGTACCTTATCGTGTTTGATGATGTATGGAATGTACATTTTTGGGATGATATTGAATTTGCTGTAATTGATAATAAAAAAAGAAGTAGGATATTTATGACAACTAGGAACATGAGTGTTGTCATGTCTTGCAAGAAATCTTCTTTCGTAGAAGTGCATGAACTACAACCTTTAACTGAAGAACAATCTTTGAAGTTGTTTAATAAGAAGGCATTCCAATTTGAGTATGACGGATGTTGTCCAAGAAATCTCATTGATATATCTTCTAAAATTGTTAGAAAATGCAATGGCTTACCACTAGCAATTGTTGTTATTGATGATTACAGAGTTCAATCAAAGAGGTTGATTCGACAATGGATAGCTGAAGGATTTGTGTGGAAGGAAAGGGGGAAGACATTGGAAGAAGTTGCAGAAGGATATTTAATAGAGTTGATTCATAGAAATTTGGTGCAAGTATCTTCAGCTAGAATTGATGGAAAACCTAAATCTTGTCTTGTTCATGATCAATTTCGTGAGATGATCCTTAAAAAAATTGATGATTCAAGTTTTTGCAAGCATATTAGTGAAGATGGGCAGTCATCCTTAAGTGGAATAATTCGGCGCCTATCAATAGTAACTACTTCCAGTGGTTTAAATGAACTTATGGAAAGCTCACATATTCGGTCACTGATTGTTTTTATAGATAAAGAATTACATGTAGACTTTGGAAGGAGAATCTTGACTAAATGCAAGTTGCTGAAGGTGCTCGATTTTGAAGATGCTCCATTGTTTAATGTTCCTACAAATTTAGGAAGTTTGATCTACTTGAAGTATTTAAGGTTAAGGTATGAAGAGCTAGATAAACTTCCAAAATCCATTGGCATGCTCCAAAACCTAGAGACGTTGGATGTAAAAGGCACAAATGTTCGTGTGTTGCCAAAGGAGATTAGCAAGCTTAAAAAGCTACGACATCTTATTGGCTACCGAATATCTTTGGTTCGATTGAAGAATGGCATTGGAGGTATGACATCCCTACAAACTCTGTGTTATGTTGATTTAAATGTCGATGGAGTGGTAGAGCTAATTAGAGAGCTAGGAAAGCTGAAAAAGTTAAAGCAATTGGGGTTAGTTGAAGTTGGGAGAGTACCTGGGATGGTTCTATCTTCCTCACTGAATGAGATGCGACACTTGGAGAAACTAAACATTGAATCAAAATTGACAAGTAACGGTGAAGTCCTTGATTTGAATTTGATTTCACCCCCACCAATGCTTCAAAGTTTTAGACTACATGCAAGGTTAGAGAAGTTGCCAGACTGGATTCCCAACCTTCAAAATGTAGTTCAGTTGAAGTTGGCATTCTCCCATCTAAATGAAGATCCAACGGAATCACTACAAAATTTGCAAAACTTGTTGTCCCTCTCTATCATTGACTATGCTTATGAAGGAGAAAGTTTGCGATTCCAAGATGGAGGGTTTCAAAAACTAAAAGAACTATTCCTTGCTAAAATGAGGAACTTGAATTCAATTGTTATCGAAAAAGGAGCAATGCTTTCACTAAAAAAGCTCGAGTTACGAAGTATTCCCCAACTGGAGACTGTACCAACTGGCATTCAGAACATAGAGAAGCTTCAAGTTCTCAAGTTGAAGTCACACTCCTATTTCAGGAAAGTTAAGGTGCTAGGCTTCAAGTTCAATGACAATTCCTATTCTCCAAAGGGACCTTAA 2535 0.3787 MAEIAVSLAINHFIPLLTQGVNFLGGVPNELIDIKHELESIQGFLKEADRRAVAERDNINEGVKIWVKQTREAAFRIEDIIDQYMIYVAQQPRDPGCVALIHKISHMIKTLAPRRRLAYEIQEIKLSVSEIKIRRSRYGFDYVDETSTSSTVSQDAKWHDPRRAALYMEETEVIGFEAPRDKLTDWLVKGREERTVISVVGMGGQGKSILAKKVFDSKEVIGHFEDCRVWIKVSRSYTVKRVLRDMLFKFRYTPLQDIATMDRESLINEVRNYLQQKRYLIVFDDVWNVHFWDDIEFAVIDNKKRSRIFMTTRNMSVVMSCKKSSFVEVHELQPLTEEQSLKLFNKKAFQFEYDGCCPRNLIDISSKIVRKCNGLPLAIVVIDDYRVQSKRLIRQWIAEGFVWKERGKTLEEVAEGYLIELIHRNLVQVSSARIDGKPKSCLVHDQFREMILKKIDDSSFCKHISEDGQSSLSGIIRRLSIVTTSSGLNELMESSHIRSLIVFIDKELHVDFGRRILTKCKLLKVLDFEDAPLFNVPTNLGSLIYLKYLRLRYEELDKLPKSIGMLQNLETLDVKGTNVRVLPKEISKLKKLRHLIGYRISLVRLKNGIGGMTSLQTLCYVDLNVDGVVELIRELGKLKKLKQLGLVEVGRVPGMVLSSSLNEMRHLEKLNIESKLTSNGEVLDLNLISPPPMLQSFRLHARLEKLPDWIPNLQNVVQLKLAFSHLNEDPTESLQNLQNLLSLSIIDYAYEGESLRFQDGGFQKLKELFLAKMRNLNSIVIEKGAMLSLKKLELRSIPQLETVPTGIQNIEKLQVLKLKSHSYFRKVKVLGFKFNDNSYSPKGP 844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01196 844 SUPERFAMILY L domain-like 444 820 - -
Trre6g01196 844 Pfam NB-ARC domain 179 396 IPR002182 GO:0043531
Trre6g01196 844 CDD RX-CC_like 2 132 IPR038005 -
Trre6g01196 844 Gene3D Ribonuclease Inhibitor 491 843 IPR032675 -
Trre6g01196 844 Gene3D - 334 412 IPR042197 -
Trre6g01196 844 Gene3D - 159 329 IPR027417 -
Trre6g01196 844 Gene3D - 4 118 - -
Trre6g01196 844 PRINTS Disease resistance protein signature 564 580 - -
Trre6g01196 844 PRINTS Disease resistance protein signature 372 386 - -
Trre6g01196 844 PRINTS Disease resistance protein signature 196 211 - -
Trre6g01196 844 PRINTS Disease resistance protein signature 273 287 - -
Trre6g01196 844 Pfam Rx N-terminal domain 5 94 IPR041118 -
Trre6g01196 844 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 385 IPR027417 -
Trre6g01196 844 PANTHER DISEASE RESISTANCE PROTEIN RP 384 789 IPR044974 GO:0006952
Trre6g01196 844 FunFam Probable disease resistance protein At1g61300 156 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01196 Trre-Chr6 9219518 9222492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01196 196 379 WRKY Transcription Factor Family AT5G45050 27.273 2.33e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01196 K13457 - gmx:100819372 727.628