Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01177 ATGCCAAGTGTTAAACCAAATCCATCAGACAAAGACTCAGAACCATTCGTCGAGACCGATCCAACCAGACGATACGGCCGATACAACGAACTCCTAGGATCAGGTGCTTGTAAAAAAGTATACAGAGCATTTGATCAAGAAGAAGGAATAGAAGTAGCTTGGAATCAAGTTAAGCTCAGAAACTTCAGCAATGATCCTGCAATGATTGATAGACTTTACTCTGAAGTGAGGTTGCTTAGAAGCATGACAAACAAAAACATCATTGCTCTTTATAACTTTTGGAGAGATGAGGATCATAATACTTTGAATTTCATCACTGAGGTTTGTACAAGTGGAAATTTGAGAGAGTATAGGAAGAAACATAAACATGTTTCTGTTAAGGCTTTGAAGAAGTGGTCTAAGCAGATTTTGGAAGGGTTGAATTATTTGCATCTTCATGATCCTTGTATCATCCATAGAGATCTCAATTGCAGTAATGTTTTTGTCAATGGAAACACTGGCCAGGTCAAGATTGGTGACTTAGGTTTGGCAGCAATTGTTGGAAAGAACCATTCAGCACATTCAATTCTAGGGACACCAGAATTTATGGCACCAGAATTATATGAAGAGAATTACACTGAAATGGTGGACATATACTCATTTGGAATGTTAGTCCTAGAGATGGTGACACTAGAGATTCCTTATAGTGAATGTGATAATGTTGCAAAAATATACAAAAAGGTATCTTCAGGTGTGAGACCTCAATCATTGAACAAGGTTAAAGATGCTGAAGTCAAGGCTTTCATTGAAAAATGTCTTGCTCAACCAAGGGCTAGACCTTCTGCTCAAGAATTGCTTAAGGATCCTTTCTTTGGTGTTTTAGATAATGATGAGAATGATGATGATAATGACTCAGTTATTTTGTAA 906 0.372 MPSVKPNPSDKDSEPFVETDPTRRYGRYNELLGSGACKKVYRAFDQEEGIEVAWNQVKLRNFSNDPAMIDRLYSEVRLLRSMTNKNIIALYNFWRDEDHNTLNFITEVCTSGNLREYRKKHKHVSVKALKKWSKQILEGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYEENYTEMVDIYSFGMLVLEMVTLEIPYSECDNVAKIYKKVSSGVRPQSLNKVKDAEVKAFIEKCLAQPRARPSAQELLKDPFFGVLDNDENDDDNDSVIL 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01177 301 Gene3D Phosphorylase Kinase; domain 1 10 107 - -
Trre6g01177 301 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01177 301 FunFam Probable serine/threonine-protein kinase WNK1 10 107 - -
Trre6g01177 301 MobiDBLite consensus disorder prediction 1 21 - -
Trre6g01177 301 SUPERFAMILY Protein kinase-like (PK-like) 20 284 IPR011009 -
Trre6g01177 301 CDD STKc_WNK 24 284 - -
Trre6g01177 301 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 285 - -
Trre6g01177 301 Gene3D Transferase(Phosphotransferase) domain 1 109 287 - -
Trre6g01177 301 FunFam probable serine/threonine-protein kinase WNK9 109 290 - -
Trre6g01177 301 Pfam Protein kinase domain 29 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01177 Trre-Chr6 9076604 9078145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01177 10 287 MAP Kinase Kinase Kinase AT5G55560 82.796 4.76e-178 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Trre6g01177 Pkinase 2.1e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01177 K08867 - gmx:100818126 540.036