Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre6g01167 | ATGTGTGATCCGTGTGCAAGTGTAATTTCCTGTGCTCGTGATAACTTGCTTCCACTAGCCCGTGATCATTTGCTTCCACTAGCTCGTAAACATTTGCTTCCACTAGTCCGTGATCATATGCTTCCAATACTAAAGGAATCTGTCAACATGATTAGGGGTGTCCCAAATGATGAAATTGCACACATGAAACATGAACTTGAAACCATTGAAGAAGCCATCCATCAAGCAGATAAAATGGCTGATGCTGAAGGAGATGACCTAGCTGATGGAACCAGAGAAAAGATCAAGCAGCTGATAGAAGCATCTTTTCGCATACAAGATGTCATCGATGAATACATCATCCGTGAGGAGCAACAACTTCCAGATCCTGGATGTGTTGATGGTGCTTCTGACTATGTCAAAACTAAGATTCTCCGTCTCCAAATAGCCCATGATATTCAGATGATCAAATCCCGAATCAGTGAAATAAAAGATACAAGCTCTAAAAAGGATCATGAAGGTTCAAGCAGTTCTATCACAAACCCAAATGCCACAGAATTGCAGAACCTTCGAAAGGCTCCTTTTTACATGAAGGAAGCCGATGTTGTCGGCTTTGAAAAGCCAAGAGACAAATTGGTTGATTGGCTGGCAAAGGGAAGAGATGAGCTCACAGTTGTCTCCGTGGTAGCAATGGGAGGACAAGGAAAAACTACTCTTGCTAAAAAAGTTTTCGACCAAGTTAAGGGACACTTTGATTATCATGTATGGATCACAGTGTCACAATCATACAATATAGAAGAGTTGCTGAGAGGCATGTTGAAGGATCTTTGCGAACAACAAAAAGTCAAACCTCCTCAAATGATTCATGAAATGAATAAAGATTCATTAGTGGATTTAGTGAGAAACTACTTGCAGGACAAAAGGTACGTTGTAGTTTTTGATGATGTATGGGATTCACCTTTTTGGGCTGATATTAAATTAGCTATGATTGATAAACAAAAAGGTTGTAGGATATTAATCACCACTAGGTTCATGGATGTTGCCACTTCTTGTAGGGAATCTTCTTTTGTTGAAATCCATGAATTGAAAGGTTTAGATGATGAACAATCTTTAAAATTGTTCAATAAGAAGGCATTTTATGACTTGAAGGAAGTTTGTCCGCCTAATCTTATTGATATATCTTCCAAAATTGTTAAAAAATGTGGTGGGTTACCATTAGCAATTGTAGTCATGGGTGGTCTTTTATGCAAAACTAGAATTACAATTGATTGGTATAACTTTAATGACAATATCAAGCCAAAGTTAAAGAAAGATTTTGTGATAAACAAAATTTTAGTTCTTAGCTACCATGATTTGTCTTACAATCTCAAGTCATGTCTGTTATATTTTGGAATATATCCTGAAGATTGTAAAGTTAATTCCAAGAGACTAATTCGACAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGAATGACTCTGGAAGAGGTTGCAGAAGGATACTTAACAGAATTAATCCATAGAAGTTTGGTGCAAGTAATTTCAATCGGCATTGATGGAAGAGCAAAAAGTTGTCGTGTTCACGATCTAGTGCATGATATGATCCTTAAAAAATTCGAGGATTTAAGTTTTTGCAAGAAGATTACTGAGGATGGCCAATCATCAGCTTTAAATGGAATAGTTCGACGCCTATCAATAACAACCAATTCAGATAATTTAATGGAAAGTGTTGAAAGGTTGCAGGTCCGGTCCCTGCTTGTTCCCGAACCTTACACATTACATGAATCCGTTGTAAGGCAACTTACTACAAAATACAGGTTGTTGAAGGTGTTTGATGCTCAACTTACTGGAGAAACTGGTGAAGTTATTGATGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTGTCAAGTGGGAAGAAATTGGACTTCCAAAGTCCATTGGCATGCTTGAGAACCTAGAGACCTTGGATTTAACAGGTACATCATTGTTTCGTCTTCCCAAAGAAATTTGTAAACTTAGAAAGTTACGACATTTTCTAGGCGACGAATTGCATTTGGTTCATCAATTGAAGGATTGTATTGGAGGCATGAAATCCCTACAAACTCTATCTCTGCTATGTTTAAATGAAAATGATGAAGACATAGAGCTAATCGAAGAGCTAGGAAAGTTGAAGCAACTAAAGAAATTGGGCTTGAGAGGTGTCATGGGAAAATTTAAGAGTGTTTTATCTTCTTCAATCAATAAGATGCAACAAATGGAAAAACTGTTTATTGAATCAGATGAATACATTGATTTGGATTTGAATTTACCTAAGCTTCAATATCTTGTACTGAAAGGTCCGTTGGAGAAGTTGCCGGAGTGGATTCAAAAGCTTCAGTATCTTGTTAAACTGAAGCTTGTTTCATCCAAACTAACAGAGGATTCAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTCCATTTCTCTCTGCGAAAATGCTTATGCAGGCGAAACCTTGCATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTACATCTTAATGATATGTATAAATTGAAAGACATCCTTATTGACCAAGGTGCGTTGCCCTCTCTGAAAAAGTTCCACATATGCTCATTTACAGGCCTCCGCCTCGAGAAGATACCAACAGGCATTCAACACTTAAAGAAGCTTGAAGATCTCAGTATTACTTATGTGAGTGCGGAATTTATGGACAACTTTTTACTCAATGGAGGAAAAGACAATTGGATCCTCAAGCAAGTGCCCTTGGTAGAAATTAAAGATCTGTATGAGGATAGGGAAATAGCCAAGGCAATGTCCGAGAAATGGATGCTCGATTATGCTTTAAAAAATGTCCGAAAAAATCACATTTTTTTTTAA | 2874 | 0.372 | MCDPCASVISCARDNLLPLARDHLLPLARKHLLPLVRDHMLPILKESVNMIRGVPNDEIAHMKHELETIEEAIHQADKMADAEGDDLADGTREKIKQLIEASFRIQDVIDEYIIREEQQLPDPGCVDGASDYVKTKILRLQIAHDIQMIKSRISEIKDTSSKKDHEGSSSSITNPNATELQNLRKAPFYMKEADVVGFEKPRDKLVDWLAKGRDELTVVSVVAMGGQGKTTLAKKVFDQVKGHFDYHVWITVSQSYNIEELLRGMLKDLCEQQKVKPPQMIHEMNKDSLVDLVRNYLQDKRYVVVFDDVWDSPFWADIKLAMIDKQKGCRILITTRFMDVATSCRESSFVEIHELKGLDDEQSLKLFNKKAFYDLKEVCPPNLIDISSKIVKKCGGLPLAIVVMGGLLCKTRITIDWYNFNDNIKPKLKKDFVINKILVLSYHDLSYNLKSCLLYFGIYPEDCKVNSKRLIRQWIAEGFVKEEEGMTLEEVAEGYLTELIHRSLVQVISIGIDGRAKSCRVHDLVHDMILKKFEDLSFCKKITEDGQSSALNGIVRRLSITTNSDNLMESVERLQVRSLLVPEPYTLHESVVRQLTTKYRLLKVFDAQLTGETGEVIDDLGSLNHLKYFSVKWEEIGLPKSIGMLENLETLDLTGTSLFRLPKEICKLRKLRHFLGDELHLVHQLKDCIGGMKSLQTLSLLCLNENDEDIELIEELGKLKQLKKLGLRGVMGKFKSVLSSSINKMQQMEKLFIESDEYIDLDLNLPKLQYLVLKGPLEKLPEWIQKLQYLVKLKLVSSKLTEDSMKLLKSMPNLLSISLCENAYAGETLHFQNEWFKNLKELHLNDMYKLKDILIDQGALPSLKKFHICSFTGLRLEKIPTGIQHLKKLEDLSITYVSAEFMDNFLLNGGKDNWILKQVPLVEIKDLYEDREIAKAMSEKWMLDYALKNVRKNHIFF | 957 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre6g01167 | 957 | Gene3D | - | 176 | 352 | IPR027417 | - | |
Trre6g01167 | 957 | Gene3D | - | 442 | 533 | IPR036388 | - | |
Trre6g01167 | 957 | FunFam | Probable disease resistance protein At1g61300 | 177 | 348 | - | - | |
Trre6g01167 | 957 | Pfam | Rx N-terminal domain | 42 | 119 | IPR041118 | - | |
Trre6g01167 | 957 | PRINTS | Disease resistance protein signature | 296 | 310 | - | - | |
Trre6g01167 | 957 | PRINTS | Disease resistance protein signature | 218 | 233 | - | - | |
Trre6g01167 | 957 | PRINTS | Disease resistance protein signature | 643 | 659 | - | - | |
Trre6g01167 | 957 | PRINTS | Disease resistance protein signature | 394 | 408 | - | - | |
Trre6g01167 | 957 | FunFam | Probable disease resistance protein At1g63360 | 442 | 531 | - | - | |
Trre6g01167 | 957 | Gene3D | Ribonuclease Inhibitor | 559 | 908 | IPR032675 | - | |
Trre6g01167 | 957 | Gene3D | - | 35 | 147 | - | - | |
Trre6g01167 | 957 | PANTHER | DISEASE RESISTANCE PROTEIN RP | 62 | 860 | IPR044974 | GO:0006952 | |
Trre6g01167 | 957 | Coils | Coil | 59 | 79 | - | - | |
Trre6g01167 | 957 | Gene3D | - | 357 | 441 | IPR042197 | - | |
Trre6g01167 | 957 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 182 | 456 | IPR027417 | - | |
Trre6g01167 | 957 | MobiDBLite | consensus disorder prediction | 157 | 177 | - | - | |
Trre6g01167 | 957 | Pfam | NB-ARC domain | 199 | 430 | IPR002182 | GO:0043531 | |
Trre6g01167 | 957 | SUPERFAMILY | L domain-like | 520 | 897 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre6g01167 | Trre-Chr6 | 8988445 | 8991318 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre6g01167 | 215 | 405 | WRKY Transcription Factor Family | AT5G45050 | 33.333 | 6.98e-15 | 77.8 |