Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01167 ATGTGTGATCCGTGTGCAAGTGTAATTTCCTGTGCTCGTGATAACTTGCTTCCACTAGCCCGTGATCATTTGCTTCCACTAGCTCGTAAACATTTGCTTCCACTAGTCCGTGATCATATGCTTCCAATACTAAAGGAATCTGTCAACATGATTAGGGGTGTCCCAAATGATGAAATTGCACACATGAAACATGAACTTGAAACCATTGAAGAAGCCATCCATCAAGCAGATAAAATGGCTGATGCTGAAGGAGATGACCTAGCTGATGGAACCAGAGAAAAGATCAAGCAGCTGATAGAAGCATCTTTTCGCATACAAGATGTCATCGATGAATACATCATCCGTGAGGAGCAACAACTTCCAGATCCTGGATGTGTTGATGGTGCTTCTGACTATGTCAAAACTAAGATTCTCCGTCTCCAAATAGCCCATGATATTCAGATGATCAAATCCCGAATCAGTGAAATAAAAGATACAAGCTCTAAAAAGGATCATGAAGGTTCAAGCAGTTCTATCACAAACCCAAATGCCACAGAATTGCAGAACCTTCGAAAGGCTCCTTTTTACATGAAGGAAGCCGATGTTGTCGGCTTTGAAAAGCCAAGAGACAAATTGGTTGATTGGCTGGCAAAGGGAAGAGATGAGCTCACAGTTGTCTCCGTGGTAGCAATGGGAGGACAAGGAAAAACTACTCTTGCTAAAAAAGTTTTCGACCAAGTTAAGGGACACTTTGATTATCATGTATGGATCACAGTGTCACAATCATACAATATAGAAGAGTTGCTGAGAGGCATGTTGAAGGATCTTTGCGAACAACAAAAAGTCAAACCTCCTCAAATGATTCATGAAATGAATAAAGATTCATTAGTGGATTTAGTGAGAAACTACTTGCAGGACAAAAGGTACGTTGTAGTTTTTGATGATGTATGGGATTCACCTTTTTGGGCTGATATTAAATTAGCTATGATTGATAAACAAAAAGGTTGTAGGATATTAATCACCACTAGGTTCATGGATGTTGCCACTTCTTGTAGGGAATCTTCTTTTGTTGAAATCCATGAATTGAAAGGTTTAGATGATGAACAATCTTTAAAATTGTTCAATAAGAAGGCATTTTATGACTTGAAGGAAGTTTGTCCGCCTAATCTTATTGATATATCTTCCAAAATTGTTAAAAAATGTGGTGGGTTACCATTAGCAATTGTAGTCATGGGTGGTCTTTTATGCAAAACTAGAATTACAATTGATTGGTATAACTTTAATGACAATATCAAGCCAAAGTTAAAGAAAGATTTTGTGATAAACAAAATTTTAGTTCTTAGCTACCATGATTTGTCTTACAATCTCAAGTCATGTCTGTTATATTTTGGAATATATCCTGAAGATTGTAAAGTTAATTCCAAGAGACTAATTCGACAATGGATAGCTGAAGGGTTCGTAAAGGAGGAAGAGGGAATGACTCTGGAAGAGGTTGCAGAAGGATACTTAACAGAATTAATCCATAGAAGTTTGGTGCAAGTAATTTCAATCGGCATTGATGGAAGAGCAAAAAGTTGTCGTGTTCACGATCTAGTGCATGATATGATCCTTAAAAAATTCGAGGATTTAAGTTTTTGCAAGAAGATTACTGAGGATGGCCAATCATCAGCTTTAAATGGAATAGTTCGACGCCTATCAATAACAACCAATTCAGATAATTTAATGGAAAGTGTTGAAAGGTTGCAGGTCCGGTCCCTGCTTGTTCCCGAACCTTACACATTACATGAATCCGTTGTAAGGCAACTTACTACAAAATACAGGTTGTTGAAGGTGTTTGATGCTCAACTTACTGGAGAAACTGGTGAAGTTATTGATGATTTGGGAAGTTTGAACCACTTGAAGTATTTTAGTGTCAAGTGGGAAGAAATTGGACTTCCAAAGTCCATTGGCATGCTTGAGAACCTAGAGACCTTGGATTTAACAGGTACATCATTGTTTCGTCTTCCCAAAGAAATTTGTAAACTTAGAAAGTTACGACATTTTCTAGGCGACGAATTGCATTTGGTTCATCAATTGAAGGATTGTATTGGAGGCATGAAATCCCTACAAACTCTATCTCTGCTATGTTTAAATGAAAATGATGAAGACATAGAGCTAATCGAAGAGCTAGGAAAGTTGAAGCAACTAAAGAAATTGGGCTTGAGAGGTGTCATGGGAAAATTTAAGAGTGTTTTATCTTCTTCAATCAATAAGATGCAACAAATGGAAAAACTGTTTATTGAATCAGATGAATACATTGATTTGGATTTGAATTTACCTAAGCTTCAATATCTTGTACTGAAAGGTCCGTTGGAGAAGTTGCCGGAGTGGATTCAAAAGCTTCAGTATCTTGTTAAACTGAAGCTTGTTTCATCCAAACTAACAGAGGATTCAATGAAATTACTCAAAAGTATGCCAAACTTGTTGTCCATTTCTCTCTGCGAAAATGCTTATGCAGGCGAAACCTTGCATTTTCAAAATGAATGGTTTAAGAATTTGAAGGAACTACATCTTAATGATATGTATAAATTGAAAGACATCCTTATTGACCAAGGTGCGTTGCCCTCTCTGAAAAAGTTCCACATATGCTCATTTACAGGCCTCCGCCTCGAGAAGATACCAACAGGCATTCAACACTTAAAGAAGCTTGAAGATCTCAGTATTACTTATGTGAGTGCGGAATTTATGGACAACTTTTTACTCAATGGAGGAAAAGACAATTGGATCCTCAAGCAAGTGCCCTTGGTAGAAATTAAAGATCTGTATGAGGATAGGGAAATAGCCAAGGCAATGTCCGAGAAATGGATGCTCGATTATGCTTTAAAAAATGTCCGAAAAAATCACATTTTTTTTTAA 2874 0.372 MCDPCASVISCARDNLLPLARDHLLPLARKHLLPLVRDHMLPILKESVNMIRGVPNDEIAHMKHELETIEEAIHQADKMADAEGDDLADGTREKIKQLIEASFRIQDVIDEYIIREEQQLPDPGCVDGASDYVKTKILRLQIAHDIQMIKSRISEIKDTSSKKDHEGSSSSITNPNATELQNLRKAPFYMKEADVVGFEKPRDKLVDWLAKGRDELTVVSVVAMGGQGKTTLAKKVFDQVKGHFDYHVWITVSQSYNIEELLRGMLKDLCEQQKVKPPQMIHEMNKDSLVDLVRNYLQDKRYVVVFDDVWDSPFWADIKLAMIDKQKGCRILITTRFMDVATSCRESSFVEIHELKGLDDEQSLKLFNKKAFYDLKEVCPPNLIDISSKIVKKCGGLPLAIVVMGGLLCKTRITIDWYNFNDNIKPKLKKDFVINKILVLSYHDLSYNLKSCLLYFGIYPEDCKVNSKRLIRQWIAEGFVKEEEGMTLEEVAEGYLTELIHRSLVQVISIGIDGRAKSCRVHDLVHDMILKKFEDLSFCKKITEDGQSSALNGIVRRLSITTNSDNLMESVERLQVRSLLVPEPYTLHESVVRQLTTKYRLLKVFDAQLTGETGEVIDDLGSLNHLKYFSVKWEEIGLPKSIGMLENLETLDLTGTSLFRLPKEICKLRKLRHFLGDELHLVHQLKDCIGGMKSLQTLSLLCLNENDEDIELIEELGKLKQLKKLGLRGVMGKFKSVLSSSINKMQQMEKLFIESDEYIDLDLNLPKLQYLVLKGPLEKLPEWIQKLQYLVKLKLVSSKLTEDSMKLLKSMPNLLSISLCENAYAGETLHFQNEWFKNLKELHLNDMYKLKDILIDQGALPSLKKFHICSFTGLRLEKIPTGIQHLKKLEDLSITYVSAEFMDNFLLNGGKDNWILKQVPLVEIKDLYEDREIAKAMSEKWMLDYALKNVRKNHIFF 957
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01167 957 Gene3D - 176 352 IPR027417 -
Trre6g01167 957 Gene3D - 442 533 IPR036388 -
Trre6g01167 957 FunFam Probable disease resistance protein At1g61300 177 348 - -
Trre6g01167 957 Pfam Rx N-terminal domain 42 119 IPR041118 -
Trre6g01167 957 PRINTS Disease resistance protein signature 296 310 - -
Trre6g01167 957 PRINTS Disease resistance protein signature 218 233 - -
Trre6g01167 957 PRINTS Disease resistance protein signature 643 659 - -
Trre6g01167 957 PRINTS Disease resistance protein signature 394 408 - -
Trre6g01167 957 FunFam Probable disease resistance protein At1g63360 442 531 - -
Trre6g01167 957 Gene3D Ribonuclease Inhibitor 559 908 IPR032675 -
Trre6g01167 957 Gene3D - 35 147 - -
Trre6g01167 957 PANTHER DISEASE RESISTANCE PROTEIN RP 62 860 IPR044974 GO:0006952
Trre6g01167 957 Coils Coil 59 79 - -
Trre6g01167 957 Gene3D - 357 441 IPR042197 -
Trre6g01167 957 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 456 IPR027417 -
Trre6g01167 957 MobiDBLite consensus disorder prediction 157 177 - -
Trre6g01167 957 Pfam NB-ARC domain 199 430 IPR002182 GO:0043531
Trre6g01167 957 SUPERFAMILY L domain-like 520 897 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre6g01167 Trre-Chr6 8988445 8991318 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01167 215 405 WRKY Transcription Factor Family AT5G45050 33.333 6.98e-15 77.8