Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01157 ATGGGTCGCTCCATTTTTTGTCTTCATCACTTTCTTTTTTCATCTCTTCTTATTTTCTCTTTGATGCTGAATCATGTTCATGCTCATGCCAACAAAAAGTGTTACATTGTATACTTGGGAGCACATTCACATGGTCCAACACCTTCCACCGTTGACCTTGAAATTGCTACATCTTCTCATTATGATTTATTGGGTTCAATCTTGGGAAGTGAAGAGAAGGCAAAAGAAGCAATAATTTATTCATATAATAAACAGATCAATGGGTTTGCAGCTATACTTGAAGAGGAAGAAGCTGAACAAATTGCAAAAAATCCAAAGGTTGTATCTGTGTTCTTGAGCAAAGAGCATAAACTGCACACTACACGTTCATGGGAATTTCTTGGATTGCGTGGAAATGATATGAACTCAGCTTGGCAAAAGGGAAGGTTTGGTGAGAACACCATCATAGCTAATATTGATTCAGGTGTTTGGCCGGAATCAGAGAGTTTTAGGGACAGAGGAATAGGCCCAATTCCAGCTAAGTGGCGTGGGGGTAATATTTGTCAAATAAACAAACTTCGAGGTTCTAAGAAAAATCCATGTAACAGGAAGCTAATTGGAGCAAGATTTTTCAACAAAGCATTTGAATCAGCGAAGGGAAAACTTTCTCGTTCAGAACGAACAGCACGTGACTTTGTAGGTCACGGTACTCACACGCTATCAACAGCAGGTGGAAATTTCGTACAAGGTGCAAGTATATTCAGTATTGGCAACGGTACCATAAAAGGTGGTTCGCCAAAATCAAGAGTTGCAACCTACAAAGTGTGTTGGTCACAAACAGATGTTGATAATTGCTTAGGCGCTGATGTATTAGCTGCTATTGATCAAGCAATTGATGATGGTGTTGATTTGATCTCAGTTTCTGCTGGAGTCCAAACTAGTACAAATCCTCAACAAATTTTCAAAGATCCGGTTTCTATAGGCGCATTTCATGCACTTTCTAGAAATATATTGTTGGTTGCCTCAGCAGGAAATGACGGACCTACCCCTGGAAGTGTTGCTAATGTTGCTCCATGGGTCTTCACAGTTGCTGCTAGTACATTAGATAGAGACTTTAGCAGTAATATTACCGTTGGTAACAAAACAATGACGGGAGCCAGTCTTTTTGTAAACTTGCCTCCCAATCAGTCTTTTACTGTAGTGATTTCTACTGATGCTAAATTTGCCAATGCGACAAATCGAGATGCTCAATTTTGTAGACCGGGAACACTTGATCCTTCAAAAGTGAATGGTAAAATAGTGTTGTGTGTTCGAGAAGGGAAAATAAAATCAGTTTCAGAGGGTCAAGAAGCTTTATCTGCAGGAGCAAAGGGAGTGATTATGAAAAATCAGCCTCAAATTAGCGGAAACACACTTCTTTCTGAGCCTCATGTTTTGTCTACTATCAATATCAACTATCATCCGCCTAAAAACGATGCAACAGGACATAGTATTGATATAATTCCAACAGATATAAAGTCAGGTACGAAAATAAGAATCTCACAAGCAAAAACTTTCTTCGGAAGAAAACCAGCTCCAGTTATGGCTTCATACTCGTCTAGAGGACCAAATAAAGTTCAACCTTCAATACTCAAGCCTGATGTAACTGCACCGGGTGTGAACATACTTGCTGCCTTTTCATTGTCTGCAAGTGTATCTAATTTAATTACAGACAACCGTCGAAATTTTCCATTTAATGTCATGCAAGGAACTTCTATGTCGTGTCCTCATGTTGCTGGCACTGCTGGACTCATCAAAACACTTCATCCCAATTGGAGTCCAGCAGCTATTAAATCGGCTATCATGACCACTGCAACCACAAGAGATAACACCAACAAGCCAATAACCGATGCATTTGAAAAAACACTTGCAAATCCATTTGCATATGGTGCAGGACATATTCAACCCAACAGTGCAATAGATCCAGGACTTGTTTATGATTTAACCATTGTTGATTACTTGAACTTCTTATGTGCTTCTGGATACAACCAAAAACTCATTTCATCAATTAATTTCAAAAGGAGATTTACTTGTTCAGGATCTCATAGCATAAATGACTTGAATTACCCTTCAATCACATTACCAAATCTTGGATTAAACATTGTTAATGTGACTAGGACAGTCACCAATGTTGGGCCACCAAGTACATATTTTGTAAAAGCTCAATTACCTGGATATAAAATAGTTGTTGTGCCAAATTCCTTGAATTTCAAGAAAATTGGTGAAAAGAAGAGATTTCAAGTTGTTGTGCAAGCAACGAGTGTGACTCCAAGAAAGAAATACCAATTTGGTGAATTGAAATGGACAAATGGAAAACACATTGTAAGGAGTCCAATTACTGTTCGGCGTAAATGA 2373 0.386 MGRSIFCLHHFLFSSLLIFSLMLNHVHAHANKKCYIVYLGAHSHGPTPSTVDLEIATSSHYDLLGSILGSEEKAKEAIIYSYNKQINGFAAILEEEEAEQIAKNPKVVSVFLSKEHKLHTTRSWEFLGLRGNDMNSAWQKGRFGENTIIANIDSGVWPESESFRDRGIGPIPAKWRGGNICQINKLRGSKKNPCNRKLIGARFFNKAFESAKGKLSRSERTARDFVGHGTHTLSTAGGNFVQGASIFSIGNGTIKGGSPKSRVATYKVCWSQTDVDNCLGADVLAAIDQAIDDGVDLISVSAGVQTSTNPQQIFKDPVSIGAFHALSRNILLVASAGNDGPTPGSVANVAPWVFTVAASTLDRDFSSNITVGNKTMTGASLFVNLPPNQSFTVVISTDAKFANATNRDAQFCRPGTLDPSKVNGKIVLCVREGKIKSVSEGQEALSAGAKGVIMKNQPQISGNTLLSEPHVLSTININYHPPKNDATGHSIDIIPTDIKSGTKIRISQAKTFFGRKPAPVMASYSSRGPNKVQPSILKPDVTAPGVNILAAFSLSASVSNLITDNRRNFPFNVMQGTSMSCPHVAGTAGLIKTLHPNWSPAAIKSAIMTTATTRDNTNKPITDAFEKTLANPFAYGAGHIQPNSAIDPGLVYDLTIVDYLNFLCASGYNQKLISSINFKRRFTCSGSHSINDLNYPSITLPNLGLNIVNVTRTVTNVGPPSTYFVKAQLPGYKIVVVPNSLNFKKIGEKKRFQVVVQATSVTPRKKYQFGELKWTNGKHIVRSPITVRRK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01157 790 Gene3D - 663 789 - -
Trre6g01157 790 FunFam Subtilisin-like protease SBT1.5 146 375 - -
Trre6g01157 790 CDD Peptidases_S8_3 116 612 IPR034197 -
Trre6g01157 790 Pfam Subtilase family 144 622 IPR000209 GO:0006508|GO:0008236
Trre6g01157 790 Pfam PA domain 403 464 IPR003137 -
Trre6g01157 790 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Trre6g01157 790 PRINTS Subtilisin serine protease family (S8) signature 224 237 IPR015500 -
Trre6g01157 790 PRINTS Subtilisin serine protease family (S8) signature 575 591 IPR015500 -
Trre6g01157 790 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 787 IPR045051 -
Trre6g01157 790 ProSiteProfiles Serine proteases, subtilase domain profile. 123 646 - -
Trre6g01157 790 Pfam Fibronectin type-III domain 692 787 IPR041469 -
Trre6g01157 790 FunFam Subtilisin-like protease SBT5.3 23 119 - -
Trre6g01157 790 CDD PA_subtilisin_like 368 479 - -
Trre6g01157 790 Gene3D - 362 513 - -
Trre6g01157 790 SUPERFAMILY Subtilisin-like 118 650 IPR036852 GO:0004252|GO:0006508
Trre6g01157 790 Gene3D Peptidase S8/S53 domain 147 659 IPR036852 GO:0004252|GO:0006508
Trre6g01157 790 Pfam Peptidase inhibitor I9 35 119 IPR010259 -
Trre6g01157 790 ProSitePatterns Serine proteases, subtilase family, serine active site. 576 586 IPR023828 -
Trre6g01157 790 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 119 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01157 Trre-Chr6 8913935 8920251 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01157 9 788 Subtilisin-like Serine Gene Family AT2G04160 50.633 0.0 731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01157 - - gmx:100803751 1209.51