Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01155 ATGTTGTTGATAATTCTCATTGTCCTTCCAACACTTTCATGGTCACAAGCTGTAGTAGCTGAAGCCACTGAAGCACAAGCTCTTTTAAAATGGAAAAATAGCTTTGATAACCAAAGTCAATCACTCTTATCAACTTGGAAAAATACCACAAATCCATGTGATGATAAATGGAAAGGAATTAATTGTGATAAATCCAATTCCATTTCTACCATAAACCTTGAAAGTTTTGGAGTAATAGGTACACTTCACTCTCTCACTTTCTCTTCATTACCAAACCTTATAACCTTAAATATCTACAATAACAACTTTTATGGAACCATTCCACCTCAAATTGGTAACATGTCTAAAATAAATGTCTTGAATTTTTCTTATAACTCTTTTGATGGTTCCATTCCTCAAGAAATGTGGACATTAAGGACTTTAAAAGGCCTTGATCTTCTTAGTTGTAAATTGAGTGGAGAAATTTCTAATTCCATAGGAAATTTAACCAACCTATCATATCTAGATTTAGGAATCAATCATTTTTCTAGTGGTCCTATTCCTCCTGAGATTGGAAAACTGAACAAATTACGGTACCTAACAATTCGAGAAAATAATCGAATTGGTTCCATTCCACAAGAAATTTGTTTGTTGACAAATCTTATTTATCTCGATTTGGCAGCAAACTCTCTATCTGGTGTTATCCCTGAAACCATAAGCAACCTTAGCAAATTAGAACAACTTATCCTTAATGATAACAGAAAGTTGTCTGGGACAATTCCACACTCCTTGTGGAACATGTCTAGCTTGAGCTTGATCTACCTGTATAACAATAGTCTTTCTGGATCGATACCGGATTCTGTAGAAAACTTGCTTAATGTGGGTGTACTTGCACTTGATTCCAATCAACTTTCTGGATCCATTCCTTCCACAATTGGAAACTTGAAAAACATCGTTCGTTTGTTTTTAGGAATGAATCGTCTTTCTGGATTGATTCCTGCTTCTATAGGAAATTTGATCAATTTGAAAGTTCTTAGTGTCCAAGTAAACAATCTCACTGGTACTATTCCAGCTACAATTGGGAATTTGAAGCAGCTCATTGTCTTTGAAGTAGCTACCAATAAACTTCATGGTAGAATTCCAAATGGACTTTATAACATTACTGATTGGGAAGCCTTTATTGTGTCTGAGAATGATTTTGTTGGGCATTTGCCGTCGCAAATATGCTCTGGTGGGAAATTAACTCTCTTGAATGCTGATCACAACCGTTTCACCGGTCCGATACCAACAAGTTTGAAAGATTGCTCTACCATTCAAAGAATTAGAATCGAGGGAAATTCAATAGAAGGTGATTTAGCACAAGATTTTGGTGTGTATCCGAAGTTGAAATACGTTGATATGAGTGACAATAAACTTCATGGACACATTTCACCAAACTGGGGGAAGTGTCTTGATCTTAATACTTTCCATATATCCAACAATAATGTTTCTGGTGGTATACCATTGGAACTTATTGTCTTACCAAACCTAGGTAGGCTTCATCTTTCTTCTAATCAATTGTCTGGGAAACTTCCAAAGGAATTAGGAAACATGAAATCATTGTTTGAACTCGACTTAAGTAACAATCGTTTTACGGATAACATCCCAAAAGAAATTGGATTGTTGCAAATACTTCGAGAGTTGGATCTCGGAGGAAACGAGTTGAGTGGAAAGATACCGAATGAAGTTGCGGAGCTACCGATACTACAAAAGTTGAATTTGAGCAGAAACAAAATTGAAGGAAGCATTCCATCTAAGTTTGGTTCAGATTTGGCCATTCTTGATCTTAGTGGCAATTTTTTGAATGGAAAAATACCAACAGCTCTTGAAAATTTGGTGCAGTTGTCAATGTTGAATCTCTCTCACAATATGCTTTCAGGAACCATTCCTCAAAATTTTAAAAGGAATTTGGATTTTGTTAACATATCGGACAACCGGTTAGAAGGGTCACTTCCGAATATTCCGGCTTTTCTTAATGCTTCATTTGAGTCAGTCAAAAATAACAAAGGCTTGTGTGGAAATATCACAGGATTGGATCCTTGTGCAACAAACCATATTATCCATAGTAGAAAGAGAAAAAATGTCCTCCGATCGGTACTCATTGCTTTAGGAGCTCTAATAGTTGTGTTGTGTGGGGTCGGAATTTCGATGTATGTTTTGTGTCGGAGAAATAAATCAAATGAAGAAAGCCAAACTGAAGAAGCGCTACAAAAGGAAGTACTATTTTCAATTTGGAGTCATGATGGAAAAATGATGTTTGAAAATATCATTGAAGCGACTGAGAATTTCGACGACAAATATCTGATTGGAGTAGGAAGTCAAGGAAATGTTTACAAGGCAGAGTTGTCTGAAGGTATGGTGGTTGCTGTGAAGAAACTTCATTTAGTAACAGATGAAGAAATGTCAACTTTCAGTTCAAAGTCTTTTATGAGTGAGATTGAAACTTTGACAGGAATCAAACACAGGAACATCATAAAGCTTTATGGATTTTGCTCACATTCTAAGTTCTCATTTTTAGTTTATAAGTTCTTGGAAGGTGGAAGCTTGGATCATATACTAAACAATGACACACAAGCCATTGCATTTGATTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTGTCCTACTTGCATCATGATTGCTCACCTCCTATTATTCATCGCGATATATCAAGCAAGAATGTTCTTCTTAATCTTGACTATGAAGCTCATCTGTCTGACTTCGGGACCGCGAAGTTTCTAAAGCCTGGTTTACTCAGCTGGACTCAATTTGCAGGCACTTTTGGCTATGCAGCTCCAGAGTTGGCACAAACAATGGAAGTGAATGAGAAATGTGATGTATACAGCTTTGGAGTACTTGCTTTGGAAATCATAGTTGGAAAACATCCAGGAGATCTCATTTCATTATTTTTATCACCATCTACAAGGCCAATGGCTAATGATATGTTGTTGATAGATGTTTTAGATCAACGGCCTCAACAAGTTACGAAACCAATTGACGAGGAGGTGATGTTGATTACCAGGTTGGCATTTGCTTGCTTGAATCAAAATCCGCGTTCTCGTCCAACCATGGATCAAGTATCCAAGATGCTTGCAGCAGGAAAATCACCTTTGGAGAACCAACTTTCCATCATTAGACTAGGAGAGCTTCAATAA 3186 0.3675 MLLIILIVLPTLSWSQAVVAEATEAQALLKWKNSFDNQSQSLLSTWKNTTNPCDDKWKGINCDKSNSISTINLESFGVIGTLHSLTFSSLPNLITLNIYNNNFYGTIPPQIGNMSKINVLNFSYNSFDGSIPQEMWTLRTLKGLDLLSCKLSGEISNSIGNLTNLSYLDLGINHFSSGPIPPEIGKLNKLRYLTIRENNRIGSIPQEICLLTNLIYLDLAANSLSGVIPETISNLSKLEQLILNDNRKLSGTIPHSLWNMSSLSLIYLYNNSLSGSIPDSVENLLNVGVLALDSNQLSGSIPSTIGNLKNIVRLFLGMNRLSGLIPASIGNLINLKVLSVQVNNLTGTIPATIGNLKQLIVFEVATNKLHGRIPNGLYNITDWEAFIVSENDFVGHLPSQICSGGKLTLLNADHNRFTGPIPTSLKDCSTIQRIRIEGNSIEGDLAQDFGVYPKLKYVDMSDNKLHGHISPNWGKCLDLNTFHISNNNVSGGIPLELIVLPNLGRLHLSSNQLSGKLPKELGNMKSLFELDLSNNRFTDNIPKEIGLLQILRELDLGGNELSGKIPNEVAELPILQKLNLSRNKIEGSIPSKFGSDLAILDLSGNFLNGKIPTALENLVQLSMLNLSHNMLSGTIPQNFKRNLDFVNISDNRLEGSLPNIPAFLNASFESVKNNKGLCGNITGLDPCATNHIIHSRKRKNVLRSVLIALGALIVVLCGVGISMYVLCRRNKSNEESQTEEALQKEVLFSIWSHDGKMMFENIIEATENFDDKYLIGVGSQGNVYKAELSEGMVVAVKKLHLVTDEEMSTFSSKSFMSEIETLTGIKHRNIIKLYGFCSHSKFSFLVYKFLEGGSLDHILNNDTQAIAFDWEKRVNVVKGVANALSYLHHDCSPPIIHRDISSKNVLLNLDYEAHLSDFGTAKFLKPGLLSWTQFAGTFGYAAPELAQTMEVNEKCDVYSFGVLALEIIVGKHPGDLISLFLSPSTRPMANDMLLIDVLDQRPQQVTKPIDEEVMLITRLAFACLNQNPRSRPTMDQVSKMLAAGKSPLENQLSIIRLGELQ 1061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01155 1061 ProSitePatterns Tyrosine protein kinases specific active-site signature. 895 907 IPR008266 GO:0004672|GO:0006468
Trre6g01155 1061 Gene3D Ribonuclease Inhibitor 23 138 IPR032675 -
Trre6g01155 1061 Gene3D Ribonuclease Inhibitor 139 212 IPR032675 -
Trre6g01155 1061 SMART LRR_typ_2 524 548 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 260 284 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 500 523 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 618 641 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 211 234 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 162 187 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 90 114 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 332 356 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 308 331 IPR003591 -
Trre6g01155 1061 SMART LRR_typ_2 572 596 IPR003591 -
Trre6g01155 1061 PANTHER LEUCINE RICH REPEAT KINASE 2 329 1045 - -
Trre6g01155 1061 FunFam Leucine-rich repeat receptor protein kinase MSP1 731 849 - -
Trre6g01155 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 403 691 - -
Trre6g01155 1061 ProSiteProfiles Leucine-rich repeat profile. 526 548 IPR001611 GO:0005515
Trre6g01155 1061 Gene3D Ribonuclease Inhibitor 383 690 IPR032675 -
Trre6g01155 1061 Gene3D Ribonuclease Inhibitor 216 382 IPR032675 -
Trre6g01155 1061 Pfam Leucine rich repeat N-terminal domain 23 63 IPR013210 -
Trre6g01155 1061 Pfam Protein kinase domain 771 1039 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01155 1061 SUPERFAMILY Protein kinase-like (PK-like) 752 1041 IPR011009 -
Trre6g01155 1061 FunFam Nuclear pore complex protein NUP107 21 179 - -
Trre6g01155 1061 Gene3D Phosphorylase Kinase; domain 1 727 849 - -
Trre6g01155 1061 FunFam MDIS1-interacting receptor like kinase 2 850 1047 - -
Trre6g01155 1061 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 180 402 - -
Trre6g01155 1061 Pfam Leucine rich repeat 189 247 IPR001611 GO:0005515
Trre6g01155 1061 Pfam Leucine Rich Repeat 551 569 IPR001611 GO:0005515
Trre6g01155 1061 SUPERFAMILY RNI-like 71 379 - -
Trre6g01155 1061 ProSiteProfiles Protein kinase domain profile. 769 1049 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01155 1061 Gene3D Transferase(Phosphotransferase) domain 1 850 1053 - -
Trre6g01155 1061 SUPERFAMILY RNI-like 343 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01155 Trre-Chr6 8897782 8901055 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01155 2 943 Receptor kinase-like Gene Family AT4G08850 43.082 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre6g01155 Pkinase 1.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01155 - - gmx:100812486 1326.61