Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01153 ATGGCAGAAATGGCGGTGTCTTTAGTTCTTGACCGACTAATGAAAGAAGTCAATCTGTTGGGAGGTATTGACAAAGAATTTGCAGAAATTAAAGATGAACTGGAAAGCATTCAAGCCTTTCTTAAGGATGCTGATAAAAGAGCTGCAGCCCCTGAAGGAGACAACAGTACTGAAGGAGTCAAAACATGGGTAAGGAAGGTTAGGGAAGCAAGTTTTCTTATTGAAGATGTCATTGATGATTATCTGATCCAAGTGAGACAGCAGCCTCATGATCCTGGACTTATTCATAAGATGGCTCACTCACTCAAAATTATTACCTCACGCCATCAAATAGCGCCCAAGATTAAAGAGATTAAGTCATCTGTTCGTACGATCAGGGAAAGAGGCGAAACATATGGGTTTCAAATCCAACATTCAATTGAACGAGGATCAACAAGTTTAAGAGGAAGCCAAAATGCCAAATGGCACGACCCTCGAACGGCTGCTTTATACCTTGATGAAGCTGAAATCATAGGCTTTCAAGAACCCAAAGATAGATTGATTGATTTGTTGGTAAAGGGAAGATCCGAGCGCACAGTCGTCTCTGTAGTAGCTATGGGAGGACAAGGAAAAACAACTCTTGCCAAACAGGTTTTTGACAACAAAGAGGTAGTGGGACAATTTGAATGTTGTGTATGGATCACAGTGTCGGAATCATACTATATAGATGCGTTGCTGAGAGACATGTTGAATGAGCTATACAAACAAAAAGGGGACTCTCCTTCTCAAGATATCTCTAAAATGGATCAAAAGCCGTTGATTTATGCGCTAAGAAACTACTTGCAACAAAAGAGGTATGTTTTCGTGTTTGATGATGTGTGGAACATACATTTTTGGAATGAGATTGAACATGCATGTATTGATAATAAAATGGGGAGTAAGATATTTATTACAACTAGAAAAATGGATGTTGCCAAAAATTGTAAGAAATCATCTTTTATTGAAGTGCTTGAACTCCAACCTTTATCAGAAGATCAATCTTTTGAGTTGTTCAAAAAGAAGGCATTCCGATTTGACTTTGATGAATGTTGTCCAAATGAGCTCAATGATATATCTTTCAAAATTACTAAAAAATGCAAAGGTTTACCATTAGCAATTGTTGCCATTGGCGGTCTATTGTCTACAAAAGAAAAAAAATTAGTTGAATGGCAAAGATTTTGTGAAAATATGCCTTTAGAACTAATCAAGGATTCTAATTTGATCGGTATAAACAAAATTTTAGCTTTAAGCTATGAGGATTTGCCTTTTCATCTTAAGTCATGTTTGTTGTACTTTGGAATGTATCCAGAAGATTACAAAGTTAAATCAAAGATACTAATTCGACAGTGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACTTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTGATCCATAGAAATTTGGTGCAGGTATCTTCTGTTAGAATTGATGGAAAACCTAAAAGTTGTTTTGTTCATGATCTAATACGTGTAATGATTCTTGAAAAGTGTGAAAATTTAAGTTTCTGCAAGCATATTAGTGGAGATGATCCTTCATCATTGCCTGGAAGTATTCGGCGCCTATCAATAACAACCCATTCCGATCATTTTACGAAATGTATTGAAAAATCACATGTTCGTTCACTATTTCTTTTCACAATTTACTCACAATGTTTGAGCGAAGATTTTAAATTGAGAATCTTTACAGAATATAGGCGCTTGAAGGTGCTTGAATTTGAAGCTAGTGTATCACATAATATGATTCATGATAATTTGGGAAGCTTAATTTACTTAAAGTATTTAAGCTTCAAGAATTCTGTGTTGGAAGTGAGAGAGTATGAACTTCCCGAATCAATTGGCAACCTCCAAAACCTTGAGACTTTGGATCTGGGACCTAATATGTTCTGTAAGATACCAAAGAAGGTTAGAAATCTAAAAAAGTTACGACATTTTTTTGGCTTTGACATGTCTTTGTTTCAATTGAAGGGTGATTTAGGAGTCATGCAATCTCTACAAACTCTGAGTAGTGTGAGAATTGGTGATGATGACAATGATGATGATGGAATAGAGCTAATTAAAGAGATGGGAAAGCTAAGGCAGTTAAGGAAATTGAGCTTGACTGATGTGAAAGAAAACCATATAAGCACTTTATCTTCTTCATTGAATGTGATGCAACATTTGGAGAATTTAAGCATTGTTTCAAAAAGAATAAGCAAAAGATTCAAACATCACATTTATTTCAATTTGGATTCACCTCCATCTATGCTTCGAAGTCTTAAACTAACTGGAGGGTTGTCGAAGCTGCCAGAGTGGATTCTTCAACTTCAAAATCTTGTAAAGTTGAAGTTAGAATGGTCCTACTTAAGAGATGATCCAGTAAAGTTTTTAGAAAATATGCAAAACTTGTTGTCCCTTTCAATCAGGTACCAAGTTTATTATGGTGAAAGTCTTCATTTTCATAATGGAGGGTTTCAAAATCTAAAGGAACTAGAGATTGGTGGATTGCCTTACTTGAATTCAATTGTTATAGACAAAGGAGCATTGAAATCTCTAAAAAAGTTAGAGATATCCAATATGCCCAAACTCGAGACTGTTCCTGCCGGCATCCAACACTTAGAAAAACTTGAAGTTCTCAAACTTGGTGGAGAAATAGCATTTGATACAAAGAATATTCCGCCACTACCACATGTAACTTTTTCATTCTGGAAATTTTAA 2748 0.3563 MAEMAVSLVLDRLMKEVNLLGGIDKEFAEIKDELESIQAFLKDADKRAAAPEGDNSTEGVKTWVRKVREASFLIEDVIDDYLIQVRQQPHDPGLIHKMAHSLKIITSRHQIAPKIKEIKSSVRTIRERGETYGFQIQHSIERGSTSLRGSQNAKWHDPRTAALYLDEAEIIGFQEPKDRLIDLLVKGRSERTVVSVVAMGGQGKTTLAKQVFDNKEVVGQFECCVWITVSESYYIDALLRDMLNELYKQKGDSPSQDISKMDQKPLIYALRNYLQQKRYVFVFDDVWNIHFWNEIEHACIDNKMGSKIFITTRKMDVAKNCKKSSFIEVLELQPLSEDQSFELFKKKAFRFDFDECCPNELNDISFKITKKCKGLPLAIVAIGGLLSTKEKKLVEWQRFCENMPLELIKDSNLIGINKILALSYEDLPFHLKSCLLYFGMYPEDYKVKSKILIRQWIAEGFVKEESGNTLEEVAEGYLTELIHRNLVQVSSVRIDGKPKSCFVHDLIRVMILEKCENLSFCKHISGDDPSSLPGSIRRLSITTHSDHFTKCIEKSHVRSLFLFTIYSQCLSEDFKLRIFTEYRRLKVLEFEASVSHNMIHDNLGSLIYLKYLSFKNSVLEVREYELPESIGNLQNLETLDLGPNMFCKIPKKVRNLKKLRHFFGFDMSLFQLKGDLGVMQSLQTLSSVRIGDDDNDDDGIELIKEMGKLRQLRKLSLTDVKENHISTLSSSLNVMQHLENLSIVSKRISKRFKHHIYFNLDSPPSMLRSLKLTGGLSKLPEWILQLQNLVKLKLEWSYLRDDPVKFLENMQNLLSLSIRYQVYYGESLHFHNGGFQNLKELEIGGLPYLNSIVIDKGALKSLKKLEISNMPKLETVPAGIQHLEKLEVLKLGGEIAFDTKNIPPLPHVTFSFWKF 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01153 915 SUPERFAMILY L domain-like 503 894 - -
Trre6g01153 915 Pfam Rx N-terminal domain 5 92 IPR041118 -
Trre6g01153 915 FunFam Probable disease resistance protein At1g63360 424 513 - -
Trre6g01153 915 Gene3D - 334 423 IPR042197 -
Trre6g01153 915 Pfam NB-ARC domain 175 426 IPR002182 GO:0043531
Trre6g01153 915 PRINTS Disease resistance protein signature 193 208 - -
Trre6g01153 915 PRINTS Disease resistance protein signature 372 386 - -
Trre6g01153 915 PRINTS Disease resistance protein signature 857 873 - -
Trre6g01153 915 PRINTS Disease resistance protein signature 273 287 - -
Trre6g01153 915 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 438 IPR027417 -
Trre6g01153 915 Gene3D Ribonuclease Inhibitor 543 912 IPR032675 -
Trre6g01153 915 Gene3D - 424 515 IPR036388 -
Trre6g01153 915 CDD RX-CC_like 2 127 IPR038005 -
Trre6g01153 915 PANTHER DISEASE RESISTANCE PROTEIN RP 29 869 IPR044974 GO:0006952
Trre6g01153 915 Gene3D - 161 329 IPR027417 -
Trre6g01153 915 Gene3D - 4 112 - -
Trre6g01153 915 FunFam Probable disease resistance protein At1g61300 154 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01153 Trre-Chr6 8887555 8890302 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01153 194 391 WRKY Transcription Factor Family AT5G45050 26.699 1.33e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01153 K13457 - mtr:25489074 1037.33