Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01150 ATGGCAGAAATGGCAGTGTCTTTAGTTCTTGACCAACTGATTCCACTGTTAAGGGAAGAAGCCAAGTTGTTGGGAGGTATTCACAAAGAATTTGAAGACATTAAAAAAGAACTTCAAAGCATTCAAGCTTTTCTTAAGGATGCTGATAAAAAAGCTGAAGGAGACAACACTGACGAAGGTGTCAAATTATGGGTGAGGGAGGTTAGGGAAGCAGCTTTTCGTATTGAAGATGTCATTGATGATTATCTAATCCAAGTGAGACAGCAGTCTCGTGATCCTGGATGTGTAACTTTACTCCGTAAGATTGTTCACTCACTCAAAGTTACCCCTCGTCATCAAATAGCGTCAGAGATTCAAGATATTAAGTCATCTGTTCGTGAGATCAAAGAAAGAAGCAAAAGATATGGGTTCCAACCTTCTACTGAACAAGGATTGAGAAGCAAAAATGCCAAATGGCACGATCCTCGAATGGATTCTTTGTACATTGATGAAGCTGAAATTGTAGGCTTTCAAGCACCCAAAAATAGATTGATTGGATGGTTGATAGAGGGAAGATCTGAGCGCACTGTCATCTCTGTGGTAGGTATGGGAGGGCTAGGAAAAACAACTCTTGCCAAAAAAGTTTTTGACAGCAAAGAAGTAACGGGGGGGCACTTTGAATGTCGTGTATGGATCACAGTGTCAGAATCATACTATATAGAAGGGTTGCAGAGAGGCATGTTGAATGAGCTTTACAAACAAAAAGGAGATTGTCTTCCTCAAGATATCTCTAAAATGGATCGAGGATCATTGATTTCTGAGCTGAGAAACTACTTGCTGAAAAAGAGGTATGTTTTTGTGTTTGATGATGTATGGAACATACATTTTTGGCATGAGATTGAAAATGCATTGATTGATAATAAAAATAGGAGTAAGATATTTATTACAACAAGAAAAATGGATGTTGTCTTATGCTGTAAGAAATCTTCTTTTATTGAAGTGCATGAATTGCAACCTTTAACAAAAGAACAATCTTTTGAGTTGTTTAATAAGAAGGCATTCCGACTTGAATGTTGCCCAAAAGATCTCATTGACATATCTTTCGAAATTTCTAGAAAATGCAAGGGATTACCGCTAGCAATTGTTGCCATTGGCGGTCTATTGTGTACAAAAGAGAAAAAGTTACATGAGTGGCAGAAATTTTGTGATAACATGCCTTTAGAACTAAAGAAAGATTCTCATTTGATCGGGATAAACAAAATTTTAGCTCTCAGTTACGATGATTTACCTTTTCGTCTTAAGTCATCTTTGTTGTATTTTGGAATGTATCCAGAAGATTACATAGTTCAATCAAAGAGACTGATTCGACAATGGATAGCTGAAGGATTTGTGAAAGAAGAAAGTGGGAATACCTTGGAAGAAGTGGCAGAAGGATATTTAACAGAGTTCTTCCATAGAAGTTTAGTGCAAATATCTTCTATAGGAATTGATGGAAAAACTAAAAGTTGTTGTGTTCATGATCTAACACGTGTGATGCTTCTTGAAAAGTGTGAAGATTTAAGTTTCTGCAAGCATATCAATGAAAATGGTCATTCAACTTTAGATGGAATTATTCGACGCCTATCAATAACAACTCATTCCAATGATTTTCCGACCTGTATTGAAAACTCACATGTTCGTTCACTATTTCTTTTCTCAAATGAGTCACAATTTTTGTGCGAAGATTTTATGAGGAGAATCTTTACAGACTATAGGCGTTTGAAGGTGCTTGAGTTTGAAGTTTATTCTAAAGTTAATTTGAGTAATATCATTCATGAAAATTTGGGAAACCTGATTCACTTGAAGTATTTAAGCTTCATGAGTTCTTCTGGGGAAACGCAATTAGAACTTCCCAAATCAATTGCCATGCTCCAAAATCTGTTGACTTTGGATCTGTGA 1917 0.3625 MAEMAVSLVLDQLIPLLREEAKLLGGIHKEFEDIKKELQSIQAFLKDADKKAEGDNTDEGVKLWVREVREAAFRIEDVIDDYLIQVRQQSRDPGCVTLLRKIVHSLKVTPRHQIASEIQDIKSSVREIKERSKRYGFQPSTEQGLRSKNAKWHDPRMDSLYIDEAEIVGFQAPKNRLIGWLIEGRSERTVISVVGMGGLGKTTLAKKVFDSKEVTGGHFECRVWITVSESYYIEGLQRGMLNELYKQKGDCLPQDISKMDRGSLISELRNYLLKKRYVFVFDDVWNIHFWHEIENALIDNKNRSKIFITTRKMDVVLCCKKSSFIEVHELQPLTKEQSFELFNKKAFRLECCPKDLIDISFEISRKCKGLPLAIVAIGGLLCTKEKKLHEWQKFCDNMPLELKKDSHLIGINKILALSYDDLPFRLKSSLLYFGMYPEDYIVQSKRLIRQWIAEGFVKEESGNTLEEVAEGYLTEFFHRSLVQISSIGIDGKTKSCCVHDLTRVMLLEKCEDLSFCKHINENGHSTLDGIIRRLSITTHSNDFPTCIENSHVRSLFLFSNESQFLCEDFMRRIFTDYRRLKVLEFEVYSKVNLSNIIHENLGNLIHLKYLSFMSSSGETQLELPKSIAMLQNLLTLDL 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01150 638 FunFam Probable disease resistance protein At1g61300 152 323 - -
Trre6g01150 638 Gene3D - 158 327 IPR027417 -
Trre6g01150 638 PANTHER DISEASE RESISTANCE PROTEIN RP 32 638 IPR044974 GO:0006952
Trre6g01150 638 Gene3D - 332 418 IPR042197 -
Trre6g01150 638 FunFam Probable disease resistance protein At1g63360 419 508 - -
Trre6g01150 638 Gene3D - 419 510 IPR036388 -
Trre6g01150 638 Gene3D - 4 115 - -
Trre6g01150 638 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 151 432 IPR027417 -
Trre6g01150 638 CDD RX-CC_like 2 130 IPR038005 -
Trre6g01150 638 Pfam NB-ARC domain 172 420 IPR002182 GO:0043531
Trre6g01150 638 Pfam Rx N-terminal domain 5 92 IPR041118 -
Trre6g01150 638 PRINTS Disease resistance protein signature 628 638 - -
Trre6g01150 638 PRINTS Disease resistance protein signature 367 381 - -
Trre6g01150 638 PRINTS Disease resistance protein signature 190 205 - -
Trre6g01150 638 PRINTS Disease resistance protein signature 271 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01150 Trre-Chr6 8877327 8879243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01150 191 443 WRKY Transcription Factor Family AT5G45050 27.237 1.74e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01150 K13457 - mtr:25489074 850.506