Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01141 ATGGGGTTGGAGCTTCATATTCTTATATCAACTATCCTTGGTTTGCTCTTGTTCATAGTAATCAAAATTACCTGCAAATCAAAAGCTAAAAAAACAAACTCCAAATTGCCACCAGGTCCAAGAAAACTTCCTCTTATAGGGAACATCCACCAACTTGGAGCCTTACCTCATCAATCCCTGGCAAAATTAGCACAACAATATGGACCTCTCATGCACATGAAGCTTGGTGAACTTTCTTGCATAGTTGTTTCATCTCAAGAAATGGCTAAAGAGGTGATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCCACTTCTTGCAGCTGAAATAATCACTTATGGATATAAAGGAATGACTTTTTCTCCATATGGATCCTATTGGAGGCAGATGAGGAAGATTTGTACTATGGAGCTTTTATCACAAAAGCGCGTCGAATCTTTTCGATTACAAAGGGAAGAAGAAATAGCAAATCTTGTCAAAGATATAACTTTGAGTGAAGGGTCACCTATAAATATTAGTGAGAAGCTTGATTCATTTGCTTATGGATTAACTTCAAGAACAGCTTTTGGTGCACAAATTGAAGGATTAAGGCAAGGAATTGAGAAGCTTCATAGGGAAATGGATGACATACTAGAGAATGTTGTAAGAAATCATAAACAAAAGAATTTGGAAACTAGGGACAAGGAAGAAATAGGGGAGGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGGATAGTGATTTGGAACATCCCTTATTAGACAACGTTGTCAAAGCAACAATTTTGGATATCTTCAGTGCCGGCAGTGACACCACATTTACAATTCTAGAATGGGCAATGTCAGAATTGATTAAGAATCCACAAATAATGCAAAAAGCACAAGCTGAAAGAAGAAAGATTTCCTCTACAAAATACATAATTCATCAACTAGTGATATTGTTTGTTTGGAATGTTTTACAAATGGGTGGTAGTGGATGCCTCTTGGAAAGACAAGGACTAGATATCTACAATTACAAGTTTGTCTAA 1029 0.3654 MGLELHILISTILGLLLFIVIKITCKSKAKKTNSKLPPGPRKLPLIGNIHQLGALPHQSLAKLAQQYGPLMHMKLGELSCIVVSSQEMAKEVMKTHDLNFANRPPLLAAEIITYGYKGMTFSPYGSYWRQMRKICTMELLSQKRVESFRLQREEEIANLVKDITLSEGSPINISEKLDSFAYGLTSRTAFGAQIEGLRQGIEKLHREMDDILENVVRNHKQKNLETRDKEEIGEDLVDVLLKLQKDSDLEHPLLDNVVKATILDIFSAGSDTTFTILEWAMSELIKNPQIMQKAQAERRKISSTKYIIHQLVILFVWNVLQMGGSGCLLERQGLDIYNYKFV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01141 342 Gene3D Cytochrome P450 28 307 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 Coils Coil 194 214 - -
Trre6g01141 342 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 PRINTS E-class P450 group I signature 277 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 PRINTS E-class P450 group I signature 257 274 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 15 196 - -
Trre6g01141 342 SUPERFAMILY Cytochrome P450 37 302 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 Pfam Cytochrome P450 199 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01141 342 Pfam Cytochrome P450 37 199 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01141 Trre-Chr6 8791063 8799601 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01141 7 305 Cytochrome P450 AT3G48280 35.629 1.69e-65 213
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01141 - K23806 gmx:100819247 385.571