Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01138 ATGGCCATAGGGTATGAGCTTCAAATTCTCTTATCATCTATCATTGGTTTCCTCTTTTTCATGGTAATCAAAATTACATGGAAATCAAAAACTAAAAAAACAAACTCCAAATTGCCACTAGGACCAAGAAAACTTCCACTCATAGGGAACATCCACCAAGTTGGAGTCTTAGCTCATCATTCCCTAAGCAAATTAGCACAACAATATGGACCTCTCATGCATATGCAGCTTGGTGAACTTTCTTGCATAGTTGTTTCATCTCAAGAAATGGCTATAGAGGTTATGAAAACACATGATCTCAACTTTGCAAATAGGCCTCCACTTCTTGCACCACAAATAATCACTTATGGATATAAAGGAATGACTTTTTCTCCACATGGATCATATTGGAGGCAGATGAGGAAGATTTGTACTATGGAGCTTTTATCACAAAAGCGCGTCGAATCTTTTCGATTACAAAGGGAAGAAGAAATAGAAAATCTTGTCAAAGATATAATTTTGTGTGAAGGGTCATCTATAAATCTTAGTGAGATGCTTGATTCATTCTCATATGGATTAACATCAAGGGAAGCTTTTGGTGCAAAAGTTAAAGATAAAGAAAGGTTTAGGAAACTTATGAAGGATCTTTCAAAGATAGCTTCAGGGTTTTCTTTGGCTGATCTCTATCCTTCAATTGGAATTCTTCCAGTTCTTACAGGATTAAGAAAAAAAATTGAGAAGCTTCATAGTGAAATAGATAAGATACTTGAAAACATTGTAAGAAGCCATAGGGAAAAGAATTTAGAATCAAAGGCTGAGGAAGAAACAGGGGAGGATCTTGTTGATGTTCTTTTGAAGCTGCAAAAGTATGGTGATCTGGAACATCCCTTATCAGACATCATTGTCAAAGCAACAATTTTGGATATTTTTGGTGCCGGAGGTGACACCACATTCACAACTCTAGAATGGGCGATGTCAGAATTAATTAAAAATCAACATGTAATGAAGAAAGCTCAAGCTGAAGTAAGAAGTGTGTATAATGAAAAAGGGCATGTGGATGAAATAAGTCTTCACAAGCTCAAATACTTGAAATCAATTATTAAAGAAACACTACGTCTCCATGCACCACTTCCATTGTTACTCCCAAGGCAATGTAGTGAAAAATGTGAAATTAATGGATATGAAATACCAGCCAAAAGCAAGGTAATTGTTAATGCATGGTCAATTTGCAGAGATTCAAGATATTGGATTAATGCTGAGAAATTTGATCCAGAAAGGTTCATTGATTGTTCAATTGATTACAAAGGTGCGGATTTTCAATTTATACCATTTGGTGCTGGAAGAAGAACGTGCCCTGGCATATCATTTGGTATTGCCAACTTGGAAATTACACTTGCAAATTTGCTTTTCCATTTTAATTGGAATATGACTAATGCAAATAAGGCTAATGAACTTGACATGACAGAATCTTTTGGATTGACGGTTAGAAGAAAACATGATTTGTGGTTGGTTCCCACCATTTATCAATCTAGTTAA 1515 0.3545 MAIGYELQILLSSIIGFLFFMVIKITWKSKTKKTNSKLPLGPRKLPLIGNIHQVGVLAHHSLSKLAQQYGPLMHMQLGELSCIVVSSQEMAIEVMKTHDLNFANRPPLLAPQIITYGYKGMTFSPHGSYWRQMRKICTMELLSQKRVESFRLQREEEIENLVKDIILCEGSSINLSEMLDSFSYGLTSREAFGAKVKDKERFRKLMKDLSKIASGFSLADLYPSIGILPVLTGLRKKIEKLHSEIDKILENIVRSHREKNLESKAEEETGEDLVDVLLKLQKYGDLEHPLSDIIVKATILDIFGAGGDTTFTTLEWAMSELIKNQHVMKKAQAEVRSVYNEKGHVDEISLHKLKYLKSIIKETLRLHAPLPLLLPRQCSEKCEINGYEIPAKSKVIVNAWSICRDSRYWINAEKFDPERFIDCSIDYKGADFQFIPFGAGRRTCPGISFGIANLEITLANLLFHFNWNMTNANKANELDMTESFGLTVRRKHDLWLVPTIYQSS 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01138 504 CDD CYP71-like 68 494 - -
Trre6g01138 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Trre6g01138 504 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 Gene3D Cytochrome P450 23 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 FunFam Cytochrome P450 99A2 28 499 - -
Trre6g01138 504 PANTHER CYTOCHROME P450 71B11-RELATED 22 499 - -
Trre6g01138 504 Coils Coil 231 251 - -
Trre6g01138 504 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 Pfam Cytochrome P450 39 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01138 504 SUPERFAMILY Cytochrome P450 41 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01138 Trre-Chr6 8762047 8768412 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01138 9 501 Cytochrome P450 AT3G48280 38.057 2.09e-125 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01138 - - gmx:100819247 677.167