Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01136 ATGGAGGCTGAGCCCAAAAATATTTCATCACCTATGTTCATCATACCCTTCTTTGTATTCATATTCTTTATCCTAATTTGTATATCTAAAATATCAAAGTCTTCAAACTCCAAGTTACCACCAGGCCCACCAAAACTACCTCTTATAGGAAACTTACACCAACTTGGTTCAATGCTTCATCATAGCCTAACAAAATTATCACAAAAATATGGTCCATTAATGCATATAAAACTAGGTGAAATTTCAATCATAGTTGTGTCTTCCCCTGAAATGGCCCAAAAAATAATGAAAACACATGACATCAAATTTTCAAATAGGCCACATATTCTAGCTGCTGATATTATAACCTATGGTACAAAAGGCATGACATTTTCACCTTATGGTAGTTATTGGAGACAAATGAGAAAAATTTGCACCTTTGAACTATTAACACCAAAACGTGTTGAATCATTTAAATCGGTTAGAGAACAAGAGGTGTCAAATATTGTTAAGGAGATAGGTTTGAATGAAGGGTCATCTATTAATCTTAGTAAGATGATTAATTTATTTGCTTATGGTTTAACATCAAGAATTGCCTTAGGTGGAAAATCTGAAGATCAAGAAGCATTTATGGTTGCTATGAAAGATGTTTCAAGATTAATTGGTGGTTTTTCTGTAGCTGATTTGTTTCCTTCATTTAAAGTGCTTCATTATTTGACAGGTATAAGGTATAAAGCTGAGAAGATGCATAAAGAAATTGATAGGATTCTTGAGAAAATTCTTAGATATCATCAATTGGATACAAGTTTAGAAACAAAAATAATCAATGAAAAAGAAGGTGAAGACTTTGTTGATGTATTGTTGAGGCTTCAAAAGCAGAACAACCTTGAGCATCCTCTGTCTGATAGGATTATCAAAGCAAACATGTTGGATATCTTTAGCGCCGGAAGTGGCACGGTAGCCAAAACCTTAGAGTGGGCAATGTCGGAACTTATCAGAAATCCAAGAGTGATGGAAAAAGCACAAATCGAAGTAAGAAAGGTGTTTGATGCAAAAGCGCATGCTGATGAAACAAACCTTTACGAACTAAAATACTTAAAAGCAGTGATAAAAGAAACTTTGCGTTTACATGGTCCGGTTACATTGTTACTACCACGAGAATGCAGTGAAAATTGTGAAATTGATGGATATGAGATACCGGCTAAGACTAAGGTAATTGTAAATGCGTATGCAGTTGGAATGGATCCAAACTATTGGGATGAACCTAAGAAGTTTTACCCGGAAAGATTTATTGATAGCTTAATTGATTACAAAGGCTTGGATTTTCAATTTATTCCGTTCGGTGCTGGAAGAAGAATGTGTCCTGGTACTACATTTGGCGTTATTAATGTTGAAATCTTATTAGCAAATTTGCTTTTCCATTTTGATTGGAAAATGGTTAATGGTGTGAAAGCTGAAGAACTTGACATGAGTGAGGTATTTGGTTTGTCTGTTAGAAGGAAACATGATTTGTATTTGATTCCTATTATGTATCATTCAACTGTTGAGTAA 1530 0.3418 MEAEPKNISSPMFIIPFFVFIFFILICISKISKSSNSKLPPGPPKLPLIGNLHQLGSMLHHSLTKLSQKYGPLMHIKLGEISIIVVSSPEMAQKIMKTHDIKFSNRPHILAADIITYGTKGMTFSPYGSYWRQMRKICTFELLTPKRVESFKSVREQEVSNIVKEIGLNEGSSINLSKMINLFAYGLTSRIALGGKSEDQEAFMVAMKDVSRLIGGFSVADLFPSFKVLHYLTGIRYKAEKMHKEIDRILEKILRYHQLDTSLETKIINEKEGEDFVDVLLRLQKQNNLEHPLSDRIIKANMLDIFSAGSGTVAKTLEWAMSELIRNPRVMEKAQIEVRKVFDAKAHADETNLYELKYLKAVIKETLRLHGPVTLLLPRECSENCEIDGYEIPAKTKVIVNAYAVGMDPNYWDEPKKFYPERFIDSLIDYKGLDFQFIPFGAGRRMCPGTTFGVINVEILLANLLFHFDWKMVNGVKAEELDMSEVFGLSVRRKHDLYLIPIMYHSTVE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01136 509 FunFam Cytochrome P450 71D8 32 501 - -
Trre6g01136 509 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 CDD CYP71-like 69 497 - -
Trre6g01136 509 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Trre6g01136 509 PANTHER CYTOCHROME P450 71B11-RELATED 25 502 - -
Trre6g01136 509 Pfam Cytochrome P450 40 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 Gene3D Cytochrome P450 25 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01136 509 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01136 Trre-Chr6 8755245 8756921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01136 12 504 Cytochrome P450 AT3G48280 38.259 1.66e-130 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01136 - - gmx:100818000 712.99