Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01134 ATGCATCTAAAGCTTGGTGAAGTTTCTACTATTATAGTTTCATCATCAGAATATGCAAAAGAAGTGTTGAAAACACATGATCTTATCTTTGCATCAAGGCCTCCAATTCTAGCTTCAAAGATAATGAGTTATGATTCTCTTGGTATGTCTTTTTCACCTTATGGTGATTATTGGAGACAACTTAGAAAAATTTGTACTTTGGAGCTATTAAGTTCAAAACGTGTCCAATATTTCCAACCACTTAGAGTGGAAGAGCTTAATAATCTAATCAAAACCATTTCATCAAAAGAAGGTACACCAATGAATCTCACCAAAGAAGTGTTTTCAACAATATTTACAATCACTTCAAGAGTAGCCTTTGGAAAAAAGTGTAAGGACAATCAGAAATTCATTTCGGTCGTAAAGGAATCCGTGGCGGTTGCCGGAGGTTTTGAGTTGGGAGATTTGTTCCCTTCTTATAAATGGCTTCAAAACATATCTGGATTGAAGCATAAGCTTGAAAAGTTGCACAAACAAGCTGACAAGATAATGCAAAACATTATTGATGACCATAGGGAGGCTAATAAATCAAGAGTCAATGAAGATGAAGGTGAAAAAGTGGAGGAAGATCTTGTAGATGTGCTTTTGAATCAGGATTGTTTAAGTGATAATAGTGTCAAGGCTGTTATCTTGGATATGTATGGAGGTGGAAGTGAGACATCAGCTGCTACCATAATATGGGCAGTGGCAGAGATGATTAGAAATCCAAGAATCATGGAGAAGGTACAAGCAGAGGTAAGAGAGGTATTTGATAAAGAAAAAATACCCAATGAAAGTGACATAGAGAAGTTAAAATATTTAAAATATGTTGTAAAAGAGACATTGAGATTACACCCTCCTGGTGCATTTTTGCTTCCAAGAGAGTGCGGACAAGCATGTCAGATAAATGGTTATGATATACCTTTTAAAAGCAAAGTCATTGTAAATGTTTGGGCGGTTGGAAGAGATCCAAACCATTGGATTGATCCAGAAAAGTTTTATCCTGAAAGATTCATTGAAAATCATGTAGACTACAAGGGTAATAATTATGAGTACATTCCTTTTGGCTCTGGTAGAAGGATATGTCCGGGGATCACATTTGGTTTGGCCAATGTTGAATTTTCCCTTGCATTGTTGATGTATCACTTTGATTGGAAACTTCCCATTGGAGTGAAAAAAGAAGATATAGACATGAGTGAGATTTTTGGAGTAACTGTTAGTCAAAAAGAAGATTTATACCTTATACCTTATTCCTCCAAAAATCCTTAG 1287 0.3559 MHLKLGEVSTIIVSSSEYAKEVLKTHDLIFASRPPILASKIMSYDSLGMSFSPYGDYWRQLRKICTLELLSSKRVQYFQPLRVEELNNLIKTISSKEGTPMNLTKEVFSTIFTITSRVAFGKKCKDNQKFISVVKESVAVAGGFELGDLFPSYKWLQNISGLKHKLEKLHKQADKIMQNIIDDHREANKSRVNEDEGEKVEEDLVDVLLNQDCLSDNSVKAVILDMYGGGSETSAATIIWAVAEMIRNPRIMEKVQAEVREVFDKEKIPNESDIEKLKYLKYVVKETLRLHPPGAFLLPRECGQACQINGYDIPFKSKVIVNVWAVGRDPNHWIDPEKFYPERFIENHVDYKGNNYEYIPFGSGRRICPGITFGLANVEFSLALLMYHFDWKLPIGVKKEDIDMSEIFGVTVSQKEDLYLIPYSSKNP 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01134 428 CDD CYP71-like 1 418 - -
Trre6g01134 428 PRINTS P450 superfamily signature 359 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS P450 superfamily signature 229 246 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS P450 superfamily signature 282 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 Gene3D Cytochrome P450 1 420 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 SUPERFAMILY Cytochrome P450 2 422 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 361 370 IPR017972 GO:0005506|GO:0016705
Trre6g01134 428 FunFam Cytochrome P450 99A2 1 423 - -
Trre6g01134 428 Coils Coil 159 179 - -
Trre6g01134 428 PRINTS E-class P450 group I signature 238 264 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 281 299 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 322 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 358 368 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 368 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 18 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 218 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PRINTS E-class P450 group I signature 110 128 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01134 428 PANTHER OS08G0105600 PROTEIN 1 424 - -
Trre6g01134 428 Pfam Cytochrome P450 2 415 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01134 Trre-Chr6 8739641 8741403 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01134 1 422 Cytochrome P450 AT3G26320 41.553 2.63e-127 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01134 - K13267 gmx:100813216 625.55