Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01132 ATGAAAACACATGATGTTATATTTGCATCAAGGCCTCAAACACTAACCTCGGAGATAATATTTTATGATTCGAATGATATAGCTTTTGCGCCTTATGGCGAACATTGGAGACAACTTAGAAAGATTTGTACCATGGAACTTTTAAGTGTAAAACGCGTTCAATCTCTTTGGCCAATCAGAGAACAAGAGATTAATAATCTCGTCAAAAGGATTGCTTCAGAAGAAGGAAGAGTCGTCAATCTTTCTCAAGAAGTTGTGTCATTGATGTATTCGATCACATCAAAGGCTGCATTTGGAAAGAAATACATGGAGCAAGATGAGTTCATATCCGAGGTAAGAGAAGTATCAAAAGTAGCCAGTGGTTTCCACCTTGTAGACTTGTTTCCTTCGGCGAAATGGCTTGAAAACGTTACTGGATTGAGGCCTAAGCTAGAGAAGTTACATAAAAAAATTGATAGAATAGTTGATATAATCATCAATGATCATAAAGAGACAAAGTCAAGAACTAAAGATTGTTTAGTTGAAGGAGAGGAAGATTTTATTGATGTTCTCTTAAAGTTTGAGGATGGTAGCAGCAGTGATCAGGATTTTTGCCTAACTATGAGAAGTATGAAGGCTATAATCTTTGACATGTTCCTTGCTGGAAGTGACCAACCAGCAACCACAATTATTTGGGCAATGGCTGAAATAATAAAGAATCCAAGAGTAGTGAAAAAAGCACAAGCTGAAGTGAGAGACATATTCAAAAAAAGAGGAAAAATTGATGAAAAAAGCATTGATGAGTTAAAATACTTGAAAGCAATCATCAAAGAGGTTCTAAGAATGCATCCTTCTGCTCCTCTTTTATTACCAAGGGAGTCCGGACAAGCTTGCGAGATTGATGGTTATCACATACCAATCAAAAGTAAGTTGATAATTAATGCTTGGGCGATTGGAATGGATCCAAAATATTGGACTGAGCCAGAGAGATTTTATCCTGAAAGATTTATTGATAGTTCTCTTAATTTTAAAGGAACTAATTTTGAGTATATTCCGTTTGGTGCTGGAAGGAGAATTTGTCCGGGCATTAATTTTGGTATAGCAAATGTTGAATTAACTCTCGCCTTATTGTTGTGTCACTTCGATTGGAAACTTCCTAATGGAATGAAAAGTGAGGATTTAGATATGACCGAGGTATTTGGAGCATCTGTTAAAAGAAAAAATAACTTATGTTTGATTCCAAACACTTATCCTTCATTTAGATATGACTAA 1251 0.3557 MKTHDVIFASRPQTLTSEIIFYDSNDIAFAPYGEHWRQLRKICTMELLSVKRVQSLWPIREQEINNLVKRIASEEGRVVNLSQEVVSLMYSITSKAAFGKKYMEQDEFISEVREVSKVASGFHLVDLFPSAKWLENVTGLRPKLEKLHKKIDRIVDIIINDHKETKSRTKDCLVEGEEDFIDVLLKFEDGSSSDQDFCLTMRSMKAIIFDMFLAGSDQPATTIIWAMAEIIKNPRVVKKAQAEVRDIFKKRGKIDEKSIDELKYLKAIIKEVLRMHPSAPLLLPRESGQACEIDGYHIPIKSKLIINAWAIGMDPKYWTEPERFYPERFIDSSLNFKGTNFEYIPFGAGRRICPGINFGIANVELTLALLLCHFDWKLPNGMKSEDLDMTEVFGASVKRKNNLCLIPNTYPSFRYD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01132 416 CDD CYP71-like 1 403 - -
Trre6g01132 416 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 346 355 IPR017972 GO:0005506|GO:0016705
Trre6g01132 416 PANTHER OS08G0105600 PROTEIN 1 409 - -
Trre6g01132 416 FunFam Cytochrome P450 99A2 1 408 - -
Trre6g01132 416 PRINTS E-class P450 group I signature 203 220 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 343 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 266 284 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 307 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 223 249 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 88 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS E-class P450 group I signature 353 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS P450 superfamily signature 344 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS P450 superfamily signature 267 278 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 PRINTS P450 superfamily signature 214 231 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 SUPERFAMILY Cytochrome P450 2 405 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 Gene3D Cytochrome P450 1 407 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01132 416 Coils Coil 64 84 - -
Trre6g01132 416 Pfam Cytochrome P450 4 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01132 Trre-Chr6 8725463 8727344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01132 1 408 Cytochrome P450 AT3G26210 42.686 9.78e-116 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01132 - - gmx:100801936 554.288