Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01130 ATGGATCTTCAAATCCTATACTTTACATCGATTTTCTCCCTTTTCATTTTTGTGTTCATAGCATACAAAATAGTTACCAAGAAATGTAACTCAACTCCAAATTTACCACCAGGTCCATTGAAGCTACCTATCATAGGAAACATACACAACCTTATAGGTTCACTTCCCCATCATAAGCTAAGAGACTTATCAACAAAATATGGACCTTTAATGCATTTAAAGCTTGGTGAAGTTTCAACAATTGTAGTTTCATCAGCAGAATATGCAAAAGAAGTGATGAAAAACCATGATCTTGTGTTTGCATCAAGACCTCATATTCAAGCTTCAAAGATAATGGGTTATAACTCTCTTGGTTTAGCTTTTGCACCTTATGGTGATTATTGGAGACAACTTAGAAAAATTTGTACTTTGGAACTATTAAGTTCAAAACGTGTTCAATCTTTTCAACCAATTAGAAGTGAAGAGGTAAATAATCTAATAAAATTGATTTCTTCAAAAGAAGGATCACAAATTAATTTTACTAAAGAAGTGTTTTCAACAATTTCTACAATCACTTCTAGGACAGCTTTTGGAAAAAAGTGTAAGGAAAATCAGAAATTCATATCATTGGTAAGGGAAGCTATTAAGATAGCTGGTGGTTTTGAGTTGGGAGATTTGTTCCCTTCTTATAAATGGCTTCAACATATATCTGGATTGAAGCCTAAGCTTGAAAAGTTACATAAAGAAGCTGATTTGATTATGCAAAACATTATTGATGAGCATAGGGAGGTTAATAAATCAAGGGCTAGTGAAGATCATGGTGATGAAGTGGAGGAATATCTTGTAGATGTGCTATTGAAGCAAGATTGTTTGAGTGATAATAGTGTCAAGGCTGTGATCTTGGATATATATGGAGGTGGAAGTGAGACATCAGCTACTACCATAACATGGGCAATGGCAGAGATGATAAAAAATCCAAAAATAATGGAGAAGGTTCAAGCTGAGGTAAGAGAGGTTTTTGATAAAGAAAGAAAACCCAATGAAAGTGACATTGAGAAATTAAAATATTTAAAATGTGTTGTGAAAGAGACATTGAGATTGCACCCGCCTGCTACATTTTTGCTTCCAAGAGAATGTGGACAAGAATGCAAGATAAATGGATATGATATACCTTTTAAAAGCAAACTGATAGTGAATGCTTGGGCTATTGGAAGAGATCCAAATTATTGGGATGACTCGGAGAGGTTTTATCCTGAAAGGTTTATCGAAAGTTGTGTAGACTATAGGGGTAATAATTTTGAATTTGTTCCATTTGGTTCCGGTAGAAGAATGTGTCCAGGAATCACATTTGGTATGGTCAATGTTGAGTATCCACTTGCACTGTTGATGTATTACTTTGATTGGAAACTTCCCAATGGATTGAAAAATGAAGATTTAGACATGAGTGAGACTTTTGGATCAGCGGTTGCTCGAAAAGATGATTTACACCTTATTCCTATCACTTATCATCCTTAA 1494 0.344 MDLQILYFTSIFSLFIFVFIAYKIVTKKCNSTPNLPPGPLKLPIIGNIHNLIGSLPHHKLRDLSTKYGPLMHLKLGEVSTIVVSSAEYAKEVMKNHDLVFASRPHIQASKIMGYNSLGLAFAPYGDYWRQLRKICTLELLSSKRVQSFQPIRSEEVNNLIKLISSKEGSQINFTKEVFSTISTITSRTAFGKKCKENQKFISLVREAIKIAGGFELGDLFPSYKWLQHISGLKPKLEKLHKEADLIMQNIIDEHREVNKSRASEDHGDEVEEYLVDVLLKQDCLSDNSVKAVILDIYGGGSETSATTITWAMAEMIKNPKIMEKVQAEVREVFDKERKPNESDIEKLKYLKCVVKETLRLHPPATFLLPRECGQECKINGYDIPFKSKLIVNAWAIGRDPNYWDDSERFYPERFIESCVDYRGNNFEFVPFGSGRRMCPGITFGMVNVEYPLALLMYYFDWKLPNGLKNEDLDMSETFGSAVARKDDLHLIPITYHP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01130 497 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 FunFam Cytochrome P450 71D8 28 492 - -
Trre6g01130 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 431 440 IPR017972 GO:0005506|GO:0016705
Trre6g01130 497 SUPERFAMILY Cytochrome P450 36 492 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PANTHER OS08G0105600 PROTEIN 58 496 - -
Trre6g01130 497 CDD CYP71-like 66 488 - -
Trre6g01130 497 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 Gene3D Cytochrome P450 28 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01130 497 Pfam Cytochrome P450 36 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01130 Trre-Chr6 8697302 8698923 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01130 5 495 Cytochrome P450 AT3G26300 42.942 5.51e-141 413
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01130 - K13267 gmx:100813216 741.495