Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01125 ATGCATCTACAACTTGGTGAGGTCTTCTTTGTTGTTGTTGTTTCCTCACCAGAAGTTGCTAGAGAGGTTCTGAAAACCCATGACACTATCTTTGCATCAAGGCCTCATCTTCTAGCAGGGGAGATAGCATGTTATAACTCAACAGATATAGCATTTTCACCTTATGGTGATTACTGGAGACAACTTAGAAAGATTTGCGCTGTCGAGCTTTTGAGCTCAAAAAGGGTAAAATCTCTTTGGTCAGTAAGAGAGACTGAGATTAGTTCTCTGTTAAAAAAGATTGCTTCAAATGAAGGATCAGAAATCAATCTTACTCAAGAACTTATTTCAATGATGTATACATTCACTTCAAAGGCTGCATTTGGTAAGAAATATTTGGAACCAAAAGAGTTTATATCAGTTGTAAAACAACTTGTAAAACTTGCAGGAGGGTTCTACATTGGTGACTTGTTTCCTTCAGCTAAATGGATTCAAAATCTCTCTGGAATGAGGCCTAAGCTTGAGAAGTTAAGCCAACAAGTAGATAGGATTCTAGAACATATCATCAATGACCATAAGGAGACGAGATCAAGAAGAGCTAAACAAGGTTTGGCTGAAGCAGAGGAAGATCTGATTGATTGTCTTTTAAAATTTGAGGACAATGACGGTGACATGGATTTTCATTTAACTTCTGATAATATCAAGGCCATAGTATTGGATGTCTTCTCTGCTGGAAGTGAGACTGCATCAACTACGATTAATTGGGCAATGGCTGAGATGATAAAAGATCCAAGAGTTTATAAGAAAGCACAAGCTGAAGTGAGGGAGGGGTTCAATAGAAGAGGAAAGGTTGATGAAGCAGCAATTGATGAGTTCAAATATTTGAAAGCAATAATGAAAGAGTCACTGAGATTACACCCTACTGTTCCTCTCCTTTTTCCAAGGGAATCTGGACAAGTTTGTGAGATTAATGGCTATCACATACCTGTCAAAAGTAGAGTCCTAGTAAATGCTTGGGCCATCGGAAGGGATCCGGAATATTGGACTGACCCAGATAAGTTTTATCCCGAAAGATTTATTGGCAGTTCTATTGACTACCTAGGAAAGAATTTTGAGTACATTCCATTTGGTGCTGGAAGGAGAATTTGTCCGGGTATGAATTATGGTATGGTAAGTGTTGAACATGTCCTTGCACTTTTATTGTATCATTTTGATTGGAGGCTTCCGAATGGAATAAAAAATGAGGAATTAGAGTTGAAAGAAGAGTTTGGAGCTACTATGTCAAGAAAAGGCGATCTTTACTTGATTCCCACAACTTCTCTTCCTTTGCTTGTAACATAA 1320 0.3803 MHLQLGEVFFVVVVSSPEVAREVLKTHDTIFASRPHLLAGEIACYNSTDIAFSPYGDYWRQLRKICAVELLSSKRVKSLWSVRETEISSLLKKIASNEGSEINLTQELISMMYTFTSKAAFGKKYLEPKEFISVVKQLVKLAGGFYIGDLFPSAKWIQNLSGMRPKLEKLSQQVDRILEHIINDHKETRSRRAKQGLAEAEEDLIDCLLKFEDNDGDMDFHLTSDNIKAIVLDVFSAGSETASTTINWAMAEMIKDPRVYKKAQAEVREGFNRRGKVDEAAIDEFKYLKAIMKESLRLHPTVPLLFPRESGQVCEINGYHIPVKSRVLVNAWAIGRDPEYWTDPDKFYPERFIGSSIDYLGKNFEYIPFGAGRRICPGMNYGMVSVEHVLALLLYHFDWRLPNGIKNEELELKEEFGATMSRKGDLYLIPTTSLPLLVT 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01125 439 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 369 378 IPR017972 GO:0005506|GO:0016705
Trre6g01125 439 SUPERFAMILY Cytochrome P450 8 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 Gene3D Cytochrome P450 1 426 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS P450 superfamily signature 237 254 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS P450 superfamily signature 367 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS P450 superfamily signature 290 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 CDD CYP71-like 1 426 - -
Trre6g01125 439 Pfam Cytochrome P450 11 410 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PANTHER OS08G0105600 PROTEIN 1 433 - -
Trre6g01125 439 Coils Coil 183 203 - -
Trre6g01125 439 PRINTS E-class P450 group I signature 366 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 19 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 246 272 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 376 399 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 330 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 226 243 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 PRINTS E-class P450 group I signature 289 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01125 439 FunFam Cytochrome P450 99A2 1 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01125 Trre-Chr6 8660100 8661677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01125 1 430 Cytochrome P450 AT3G26310 40.639 3.51e-120 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01125 - - gmx:100801936 576.63