Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01124 ATGCATCTTCAACTTGGAGAGGTTTCAACTATAGTCGTTTCATCACCCGAGTGTGCTAGCGAGATGATGAAAACCCATGATATTCACTTTGCAACAAGGCCACAAATCCTAGCTACAGAAATAATGACTTACAATTCAACAAGTATAGCTTTTTCTCCTTATGGTAATTATTGGAGACAGTTACGAAAAATATGCACATCGGAGCTTTTAAGCTTAAAAAGGGTCAATTCGTACCATCCAATTAGAGAAGAGGTGCTCTCCAATCTTGTCAAATGGATTGCTTCAGAGAATGGATCACCAATAAACCTCACGGAAGCTCGTGTTACTGGTTTGAGGCCTAAGCTTGAGAGTTTTCATCGAAAAACTGATCAGATATTTGAAAACATCATCAATGACCATAAAGTGGCAAAATACACAAAAGGAAAAGATGATCAAGGTGTAGAAGAAGATCTGGTAGATGTTCTCTTAAAATATGAGGATGCTAGCAACCAGGATTTTTCCTTAACAAAAGACAATATCAAGGCCATAATCATGGATATGTTTGGTGCTGGAAGCGAGACATCCGCAAACATCATAGATTGGGCAATGGTAGAAATGCTTCCTAGTGGAATCACAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCACATTGAGAAGAAAAGATGATCTTTTATTGCTACCTTTTTCTTATCATCCTTTGTCTGTCAAGTGA 717 0.3808 MHLQLGEVSTIVVSSPECASEMMKTHDIHFATRPQILATEIMTYNSTSIAFSPYGNYWRQLRKICTSELLSLKRVNSYHPIREEVLSNLVKWIASENGSPINLTEARVTGLRPKLESFHRKTDQIFENIINDHKVAKYTKGKDDQGVEEDLVDVLLKYEDASNQDFSLTKDNIKAIIMDMFGAGSETSANIIDWAMVEMLPSGITSEELDMTEEFGVTLRRKDDLLLLPFSYHPLSVK 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01124 238 Gene3D Cytochrome P450 108 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01124 238 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01124 238 Gene3D Cytochrome P450 1 107 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01124 238 Pfam Cytochrome P450 114 200 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01124 238 Pfam Cytochrome P450 2 104 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01124 238 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 107 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01124 Trre-Chr6 8646890 8648631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01124 1 200 Cytochrome P450 AT3G26320 30.769 8.18e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01124 - - tpra:123912942 310.457