Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01123 ATGTTTCAACGATTATCCTATTTTGGTAAAGGATTGGAATGTTTCAATAAGGCTAATGATTGTTCATGCTTGCCCTCAACTCAATCCATTGTAAAAGGTGGTCAATTTTGTAAAGCATTAGCTAAATGGCCACAGAATGTTACTGGTATGAGGCCTAAACTTGAGAGTTTTCATCGACAAACAGATGAGATATTAGAAAACGTCATCAATGAGCATAAAAAGGAAAAGTACACAAAAGAAAAGGATGATCAAGGTGAAGTAGAAAAAGATCTGGCCATAATTCTGGACATTTTCGGTGCTGGAGGTGACACATCAGCAAGCACCATAAATTGGGCAATGGTGGAAATGATAAGGGATCCAAGAATAATGATGAAAGCACAAGCTGAGGTGAGAGATGTTTTCACGATGAAAGGAAGGATTGATGAAAATTACATAAACGAACTCAATTATTTGAAATTAGTTGTCAAAGAAACCCTGAGGTTACACCCTCCAGCACCTCTTTTGCTACCTAGAGAATGTGGTCAAGAATGTGAGATAAATGGTTATCAAATACCGATTAAGAGAAAGGTGATAGTCAATGCATGGGCAATTGCAAGAGATCCTAACTACTGGACTGAATCAGAGAGATTTTATCCAGAGAGATTCATTGATAGTGATATTGACTATAAAGGGAGTAATTTTGAGTATATTCCTTTTGGTGCTGGAAGAAGAATATGCCCAGGGATCACAATTGGTTTGAGAAATACTGAGTTGACCCTTGCGATGTTGTTGTATCATTTTGACTGGATGCTTTCTAGTGGAATCAGAAGTGAAGAATTGGACATGACAGAGGAATTTGGAGTCTCAGTTAGAAGAACAGATGATCTTTTATTGTTTCTTTCTGTTTATCATCCTTTGAATGTCAAATGA 909 0.3696 MFQRLSYFGKGLECFNKANDCSCLPSTQSIVKGGQFCKALAKWPQNVTGMRPKLESFHRQTDEILENVINEHKKEKYTKEKDDQGEVEKDLAIILDIFGAGGDTSASTINWAMVEMIRDPRIMMKAQAEVRDVFTMKGRIDENYINELNYLKLVVKETLRLHPPAPLLLPRECGQECEINGYQIPIKRKVIVNAWAIARDPNYWTESERFYPERFIDSDIDYKGSNFEYIPFGAGRRICPGITIGLRNTELTLAMLLYHFDWMLSSGIRSEELDMTEEFGVSVRRTDDLLLFLSVYHPLNVK 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01123 302 PRINTS P450 superfamily signature 153 164 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS P450 superfamily signature 230 239 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS P450 superfamily signature 100 117 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PANTHER OS08G0105600 PROTEIN 39 297 - -
Trre6g01123 302 SUPERFAMILY Cytochrome P450 40 292 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 109 135 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 89 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 152 170 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 239 262 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 193 217 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 PRINTS E-class P450 group I signature 229 239 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 Gene3D Cytochrome P450 13 286 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01123 302 FunFam Predicted protein 98 291 - -
Trre6g01123 302 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 232 241 IPR017972 GO:0005506|GO:0016705
Trre6g01123 302 Pfam Cytochrome P450 80 277 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01123 Trre-Chr6 8643841 8645167 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01123 83 289 Cytochrome P450 AT2G45570 50.239 1.03e-73 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01123 - - tpra:123912942 419.468