Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01122 ATGGCTCTATTAGTCCTCTACTTTGCATATCTTTTCTCCTTTATCCTATTAACCCTTATAGTACGAAAGATAAGAAAGAAGAAAACTTATTCAACTTTTAACTTACCACCAGGGCCTAGAAAGCTACCAATTATAGGAAATATACACAATCTGTTAAGCTCTCAACCCCATAGAAAATTAAGAGATTTGGCGAAAAAATATGGACCCGTGATGCATCTTCAACTTGGAGAGGTTTCTACTATTGTCATTTCATCACCCGAGTGTGCTAGGGAGGTGATGAAAACTCATGATATTCACTTTGCAACAAGGCCTCAAATCCTAGCTGCAGAAATAATGACATACAATTACACAAATATAGCTTTCTCTCCTTATGGTAATTATTGGAGACAGTTACGAAAAATATGCACATCGGAGCTTTTAAGCTTAAAAAGAGTAAATTCGTACCTACCAATTAGAGAAGAGGTGCTCTCCAATCTTGTCAAATGGATTGTTTCAGAGAATGGACCGCCAATAAACCTCACGGAAGCTGTAAATTCTTCAATATACACCATTGTTTCGAGGGCCGCCTTTGGCAATAAATACAAAGACCAAGAAAATTTTATATCAGTGATAAAAGAAGCAATAAAGGTTTCAGCAGGTTTTGACTTGGGAGATCTGTTTCCTTCTGCTAAATGGCTGCAACATGTTACTGGTTTGAGGCCTAAGCTTGAAAGTTATCATCGACAAACTGATCAGATATTTGAAAACATCATCAATGACCATAAAGTGGAAAAATACGCAAAAGGGAAAGATGATCAAGGTGAAGTAGAAGATCTGGTAGACGTTCTCTTAAATTATGAGGATGGTAGTGACCAGGATTTTTCCTTAACAAAAGACAATATCAAGGCCATAATCATGGACATTTTTGGTGCTGGAGGTGAAACATCAGCAACCACCATAGATTGGGCAATGGCAGAAATGACAAGGGATCCAAGAATAATGAAGAAAGCACAAGCTGAGCTTCCAAGTGGAATCAGAAGTGAAGAATTGGACATGACAGAGGAATTTGGAGTCTCAGTGAGAAGAAAAGATGATCTTTTATTGTTTCCTTCTGTTTATCATCCTTTGAATGTAACATGA 1119 0.3735 MALLVLYFAYLFSFILLTLIVRKIRKKKTYSTFNLPPGPRKLPIIGNIHNLLSSQPHRKLRDLAKKYGPVMHLQLGEVSTIVISSPECAREVMKTHDIHFATRPQILAAEIMTYNYTNIAFSPYGNYWRQLRKICTSELLSLKRVNSYLPIREEVLSNLVKWIVSENGPPINLTEAVNSSIYTIVSRAAFGNKYKDQENFISVIKEAIKVSAGFDLGDLFPSAKWLQHVTGLRPKLESYHRQTDQIFENIINDHKVEKYAKGKDDQGEVEDLVDVLLNYEDGSDQDFSLTKDNIKAIIMDIFGAGGETSATTIDWAMAEMTRDPRIMKKAQAELPSGIRSEELDMTEEFGVSVRRKDDLLLFPSVYHPLNVT 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01122 372 Gene3D Cytochrome P450 29 350 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 Pfam Cytochrome P450 36 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01122 372 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 11 339 - -
Trre6g01122 372 SUPERFAMILY Cytochrome P450 36 340 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01122 Trre-Chr6 8640588 8642284 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01122 1 348 Cytochrome P450 AT1G13110 36.389 4.37e-75 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01122 - - tpra:123912942 543.888