Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01121 ATGGCTTTACTAGTCTTCTACTTGCCATTTCTTTTCTCCTTTGTTCTCTTAGCCCTTGTTGTACAAATAATAGGAAAGAAGAAAACTGACCCTAACCTCCCTAAAGGACCTAGAAAGTTACCTATTATAGGAAACATACACAATGTGTTAAGCACTAAACCATATCGAAAACTAAGAGACTTGGCCAGAGAATATGGATCCTTAATGCATCTTCAACTTGGAGAGATTTCAACTATTGTAATTTCATCACCTGACTGTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTCAAATCATAGCTTCAGAATTAATTACTTATAATTCCACAGGAATAATTTCTGCTCCTTATGGTAATTATTGGAGACAACTGCGAAAAATTTGCACATTAGAGCTTTTGAGCCTAAAACGTGTCAATTCGTACCAGCCAATTAGAGAACAAGAGTTCTCTAATCTTGTAAAATGGATTGCTTCAAAGAATGGATCGCCCATCAACCTCACTCAAGCTGTATTTTCTTCAATGTACACCATTGTGTCAAAAGCTGCCTTTGGAAAGAAGTGCAAAAACCAGGAAAAATTTATATCAGCAGCAAAAGAATCAATAAAGATTGCCGGAGGTTTTGACTTAGCAGATTTGTTTCCCTCTATTACATGGTTGCGTTATGTTACTGGTTTAAGTCGTAAGCTTGAGAGGGTCCATCGACAGATTGATCAAATAATGGAAAACATCATCAGTGAGCACAAAGAGGCAAATAAACAAAGTGAATCGGAAAAAGATCTGGTAGATGTTCTCATAAAATATGAAGATGGCAACAAACGGGAATTTGTCTTAACTACAGACAATATCAAGGCCATAATCCTGGACATTTTCGGTGCTGGAGGTGAGACATCAGCAATCACCGTAGATTGGGCAATGGTAGAAATGATAAGGAATCCAAGAATAATGAAGAAAGCACAAACTGAGGTGAGAGAGGTTTTCAAAATGAAAGGAAGGGTTGATGAAAATTGCATCAATGAACTCAATTATTTGAAATTAGTTGTCAAAGAAACCCTGAGGTTATACACTCCAGCACCTCTTTTGCTACCAAGAGAATGTGGTCAAGCATGTGAGATACATGGTTATCACATACCGGTTAAGACTATGGTGATAGTCAATGCATGGGTAATTGCAAGAGATCCGAACTACTGGATCGAACCAGAAAGGTTTTATCCAGAGAGATTCATGGACAACACTATTGACTATAATGGGAGTAAATTTGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGTCCAGGAAGCATATTTGGTCTGAGAAATGTTGAACTGGCCCTTGCAAAGTTGTTGTATCATTTTGATTGGAAGCTTCCCAGTGGAATTAGAAGCGATGAATTGGACATGACTGAGGAATTTGGAGTCACAATGAGAAGAAAAGATGATCTTTTATTATTACCTTTTTCTTATCATCCTTTGCCTTAA 1494 0.3742 MALLVFYLPFLFSFVLLALVVQIIGKKKTDPNLPKGPRKLPIIGNIHNVLSTKPYRKLRDLAREYGSLMHLQLGEISTIVISSPDCAREVMKTHDINFAIRPQIIASELITYNSTGIISAPYGNYWRQLRKICTLELLSLKRVNSYQPIREQEFSNLVKWIASKNGSPINLTQAVFSSMYTIVSKAAFGKKCKNQEKFISAAKESIKIAGGFDLADLFPSITWLRYVTGLSRKLERVHRQIDQIMENIISEHKEANKQSESEKDLVDVLIKYEDGNKREFVLTTDNIKAIILDIFGAGGETSAITVDWAMVEMIRNPRIMKKAQTEVREVFKMKGRVDENCINELNYLKLVVKETLRLYTPAPLLLPRECGQACEIHGYHIPVKTMVIVNAWVIARDPNYWIEPERFYPERFMDNTIDYNGSKFEYIPFGAGRRICPGSIFGLRNVELALAKLLYHFDWKLPSGIRSDELDMTEEFGVTMRRKDDLLLLPFSYHPLP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01121 497 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 349 367 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 390 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 286 303 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 306 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 CDD CYP71-like 64 486 - -
Trre6g01121 497 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS P450 superfamily signature 297 314 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PRINTS P450 superfamily signature 350 361 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Trre6g01121 497 Gene3D Cytochrome P450 24 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 PANTHER OS08G0105600 PROTEIN 57 495 - -
Trre6g01121 497 FunFam Cytochrome P450 71D8 26 490 - -
Trre6g01121 497 Pfam Cytochrome P450 34 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 SUPERFAMILY Cytochrome P450 34 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01121 497 Coils Coil 227 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01121 Trre-Chr6 8637369 8639398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01121 5 490 Cytochrome P450 AT3G26310 40.755 6.08e-135 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01121 - - tpra:123912942 754.977