Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01118 ATGGCTATTGTTCAGGACATTTTCGGTGCTGGAGGTGAAACATCGGCAAACACCATAGATTGGGCAATGGTAGAAATGGTAAGGAATCCAAGAATAATGAAGAAAGCACAAGCTGAGGTGAGAGAGATTTTCAAAATGAAAGGAAGAGTTGATGAAAGTTGCATTAATGAACTCAATTATTTGAAATTAGTAGTCAAAGAAACCTTAAGGCTACACCCTCCAGCACCTCTTTTGTTACCAAGAGAATGTGGTCAAGCACGTGATATAAATGGTTATCACATAACGATTAAGACTAAGGTGATAGTCAATGCATGGGCGATTGCAACGGATCCAAACTACTGGACTGAACCAGAGAAGTTTTATCCGGAGAGATTCATTGATAACACTGTTGACTATAAAGGAAATAATTTCGAGTACATTCCTTTTGGTGCTGGAAGAAGAATATGTCCCGGTAGCATATTTGGTTTGAGAAGTGTTGAGTTGACTCTTGCAACGTTGTTGTTTCATTTTGATTGGAAGCTTCCGAATGGAATCAAAAGTGAAGAATTGGACATGACTGAGGAATTTGGAGTCACAATGAGAAGAAAAAAAGATCTTTTATTGTTCCCTTTTCCTGTCATGTGA 624 0.383 MAIVQDIFGAGGETSANTIDWAMVEMVRNPRIMKKAQAEVREIFKMKGRVDESCINELNYLKLVVKETLRLHPPAPLLLPRECGQARDINGYHITIKTKVIVNAWAIATDPNYWTEPEKFYPERFIDNTVDYKGNNFEYIPFGAGRRICPGSIFGLRSVELTLATLLFHFDWKLPNGIKSEELDMTEEFGVTMRRKKDLLLFPFPVM 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01118 207 Pfam Cytochrome P450 2 201 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS E-class P450 group I signature 62 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS E-class P450 group I signature 103 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS E-class P450 group I signature 139 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS E-class P450 group I signature 149 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS E-class P450 group I signature 19 45 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 Gene3D Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS P450 superfamily signature 63 74 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS P450 superfamily signature 10 27 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 PRINTS P450 superfamily signature 140 149 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 FunFam Predicted protein 8 201 - -
Trre6g01118 207 PANTHER OS08G0105600 PROTEIN 2 205 - -
Trre6g01118 207 SUPERFAMILY Cytochrome P450 2 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01118 207 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 142 151 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01118 Trre-Chr6 8626649 8627272 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01118 2 203 Cytochrome P450 AT3G26300 51.980 4.72e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01118 - - tpra:123912942 341.273