Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01117 ATGGATCCACTAGTCCTCTACTTGTTATGTCTTTTCTCATTAGTCCTCTTAGCTCTTGCAGTACAAAAAGTAAGAAAGAAACTCAAGAAAATAGACTCAGCTTTTAATCTCCCTAAAGGGCCTATAAAGATACCAATTATAGGAAATTTACACAATCTAGTTAGCTCTCAACCACATCAAAAACTAAGAGATTTAGCCAGAAAATATGGACCCTTAATGCATCTCCAACTTGGAGAGATTTCCACTGTTATAATTTCATCACCAGATTCTGCTAGGGAGGTGATGAAAACTCATGATATTAACTTTGCAATAAGGCCTCAAGTTTTAGCTTCAGTGTTACTTGCTTATAACTCCACAGGTGAAGAATTGGACATGACCGAGCAATTTGGAGTTACAGTGAACAGAAAAGATGATATTTTATTGTCACCTTTTGTTTATCGTCCTTTACCTGTCATGTGA 459 0.3617 MDPLVLYLLCLFSLVLLALAVQKVRKKLKKIDSAFNLPKGPIKIPIIGNLHNLVSSQPHQKLRDLARKYGPLMHLQLGEISTVIISSPDSAREVMKTHDINFAIRPQVLASVLLAYNSTGEELDMTEQFGVTVNRKDDILLSPFVYRPLPVM 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01117 152 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01117 152 PRINTS E-class P450 group I signature 90 111 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01117 152 Pfam Cytochrome P450 38 108 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01117 152 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 10 119 - -
Trre6g01117 152 Gene3D Cytochrome P450 28 138 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre6g01117 152 SUPERFAMILY Cytochrome P450 35 117 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01117 Trre-Chr6 8624780 8625875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01117 4 117 Cytochrome P450 AT1G13110 41.228 3.99e-23 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01117 - - pvu:PHAVU_006G0551000 147.902