Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01097 ATGTCTTTCTTTCTTCGAACCTTCTTCTTATTCTCTCTTCTCTTCCTTCTCTTCTTCTCCTCTGTTTCATCTCACGGTGGCCATGACGACGGCGACACCGATGCCGACTCTGATGCTGCAGCCACTAACAACCTCCGTTCAAAATCATTAATCCTAGCAAAAATTTGGTGCTTAATTTTAATCTTTTTAGCTACTTTCATTGCTGGTATTTCACCTTATTCATTGAGATGGAATGAAGGGTTTTTGATTCTAGGGACACAGTTTGCTGGTGGAGTGTTTCTAGGAACTGCTTTGATGCATTTTCTTAGTGATGCAAATGAGACTTTTGGTGATTTGACTGATAAAGAGTACCCTTTTGCTTTCATGTTAGCTTGTGCTGGTTATTTGATTACCATGCTTGCTGATTGTGTTATTTCTTCTCTTTTGGAAAAGCCTCATGGTGCTGCTGATGTTGAAGATCACGGGGCAGATAAAGGAAGGACCAATGATGTTACTTCTCAATCAAAATATCAGGGTTCTTCTGACACTAATGATCATGATCATGTATGTAGTACTTCAATTGGAGATAATGTATACGTATTTATTTATGTATACATAATTGCCCTTTGTGCTCATTCAGTTTTCGAGGGTTTAGCAATCGGAATTTCTGAGACAATAGCAGACGCTTGGAAAGCTTTATGGACAATCTGTTTACACAAGATATTTGCAGCCATTGCTATGGCTATTGCGCTCCTCCGGATGGCTCCTAACCGATCTCTACTATCGGTTGCAACCTATGCTTTCGCCTTTGCAATCTCTAGTCCAATTGGTGTCGCCATTGGGATTGTATTAGATTCCACAACAGAAGGTCATGCCGTTGATTGGACTTTCGCTATATCTATGGGTTTAGCTTGTGGTGTGTTTATTTATGTATCAATAAACCATCTATTTGCAAAGGGTTATGTGGCTGAAAAACATACAAAGGTTGATTCAGCCTATATGAAATTTCTTGCAGTGTCGTTGGGAATAGGAGTTATAGCTGTTGTTATGATATGGGAGACCTAA 1044 0.3956 MSFFLRTFFLFSLLFLLFFSSVSSHGGHDDGDTDADSDAAATNNLRSKSLILAKIWCLILIFLATFIAGISPYSLRWNEGFLILGTQFAGGVFLGTALMHFLSDANETFGDLTDKEYPFAFMLACAGYLITMLADCVISSLLEKPHGAADVEDHGADKGRTNDVTSQSKYQGSSDTNDHDHVCSTSIGDNVYVFIYVYIIALCAHSVFEGLAIGISETIADAWKALWTICLHKIFAAIAMAIALLRMAPNRSLLSVATYAFAFAISSPIGVAIGIVLDSTTEGHAVDWTFAISMGLACGVFIYVSINHLFAKGYVAEKHTKVDSAYMKFLAVSLGIGVIAVVMIWET 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01097 347 MobiDBLite consensus disorder prediction 161 178 - -
Trre6g01097 347 Pfam ZIP Zinc transporter 52 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Trre6g01097 347 PANTHER ZINC/IRON TRANSPORTER 53 341 - -
Trre6g01097 347 MobiDBLite consensus disorder prediction 152 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01097 Trre-Chr6 8505734 8508030 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01097 24 347 Inorganic Solute Cotransporters AT1G55910 57.530 4.69e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01097 K14709 - gmx:100791239 431.409