Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01039 ATGATGGCTACTAGCGCAGTTGCATCTTTGCCCAAATTACCACCAGTAAGAAGAGGTAGCAGCCACTGCATTGAAGAGAATGTTGTTCCTACATCTAAATTTCCAAGAGGAGTACTCGCTGTTAACAATTCAAGATCATTCAGCTGTACACAGTTTCCACTTGGTAGAAGAACTCGTTCTCAGGCAGCAACTACAATATGTGCTGCAGCTTTGAATGCAAGATGTAGTGCAGAACAAACTCAAACTATTACTCGAGAGGCTCCGACAATTACCCATCTTCCTGGTAAAGAGAAGTCCCCACAACTCGATGATGGCGGAAGTGGATTTCCACCTCGTGATGATGATGACGGTGGGGGAGGAGGTGGAGGTGGCGGCAATTGGTCTGGTGGATTTTTCTTTTTTGGGTTCCTTGCTTTTCTTGGCTTCTTAAAGGACAAAGAAAGTGATGATGATGATGGTTATGCTTACAGCGATAACCGAAGAAGAGGGTACTGA 495 0.4485 MMATSAVASLPKLPPVRRGSSHCIEENVVPTSKFPRGVLAVNNSRSFSCTQFPLGRRTRSQAATTICAAALNARCSAEQTQTITREAPTITHLPGKEKSPQLDDGGSGFPPRDDDDGGGGGGGGGNWSGGFFFFGFLAFLGFLKDKESDDDDGYAYSDNRRRGY 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01039 164 PANTHER PROTEIN FERTILITY RESTORER RF2, MITOCHONDRIAL 4 156 IPR040299 -
Trre6g01039 164 MobiDBLite consensus disorder prediction 78 122 - -
Trre6g01039 164 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01039 Trre-Chr6 8090344 8092426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01039 54 162 C2H2 Transcription Factor Family AT1G56200 68.468 1.10e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01039 - - tpra:123915156 174.481