Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01031 ATGAAGCATTTGTCACAGCAATTGGACAAGTTGCAGGTCATTAGGGGATTCATTAACGCTGCAAAGAGGCTCAAGACTCTGCAAATGAGATTGGAAAATCAATGGATATGGCATAATGAGAAGGAAGAAGATACACAGCTGGGTGCACGAGCAAATCACATGTGGGAAGAATGGTATAGAGCTCAAGGTTTTAATAATAACTCAGCGACTGACGAACAGTGTGGTACTGATGGAGACCATAATGTTCTGGTTATTGATCTTTTGGGACGTAGTCTAGAGGACCTTTTTGTCTTCTGCGGGAGCAAGTTTTCTTTAAAAACAGTTTTGATGTTGGCCGACCAGATGCTTTCGAGAATAGAATACATGCATTCCAAGGGATTTTTGCATAGAGACATAAAACCAGATAACTTTCTAATGGGTATTAGGAGGAAATCAAGTCAGGTTTATATTACTGATTTCGGACTAGGAAAAAGATATAAGGATCCCAAAACAAACAAGCATATTCCTTACAGAGAGAATAAAAATTTAACCGGGACAGCACGATACGCAAGTTGCAATACTCACTTAGGAATTGAGGAAGCCTTCCTTGGCAGGAATGCTCCTTTTAATGTCGAAAAGTGGAAAAACATACCAGAAGATATATTTAACAAGATAGTTTCCAAAGTTTTGGATGTTTTTGACATTGATAATACAACACATAATAGAGAAGTTATTCTTGATACTGCTAAAAGACTATATCGAAATCATATATGTAGATTTCATCGACATTTGAACCAATACAAGACAAATGAGATAGCTTTGGAACATAGACCAGATGATGTAGGTGAAGATGACTGGAAGTTTTTGGTAGATTATTTTTCAAGTCCTAACTATAAGGTAATCAGTGAGAGAAACAAATTAAATAAAGCAAAACAAATTATTAATCATAGATGTGGAAGAAAGTCATTTCAAGCCGTGAGCTATGATGCGAGACCCTGA 978 0.3671 MKHLSQQLDKLQVIRGFINAAKRLKTLQMRLENQWIWHNEKEEDTQLGARANHMWEEWYRAQGFNNNSATDEQCGTDGDHNVLVIDLLGRSLEDLFVFCGSKFSLKTVLMLADQMLSRIEYMHSKGFLHRDIKPDNFLMGIRRKSSQVYITDFGLGKRYKDPKTNKHIPYRENKNLTGTARYASCNTHLGIEEAFLGRNAPFNVEKWKNIPEDIFNKIVSKVLDVFDIDNTTHNREVILDTAKRLYRNHICRFHRHLNQYKTNEIALEHRPDDVGEDDWKFLVDYFSSPNYKVISERNKLNKAKQIINHRCGRKSFQAVSYDARP 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01031 325 Gene3D Transferase(Phosphotransferase) domain 1 28 195 - -
Trre6g01031 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 127 139 IPR008271 GO:0004672|GO:0006468
Trre6g01031 325 ProSiteProfiles Protein kinase domain profile. 1 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01031 325 PANTHER CASEIN KINASE-RELATED 73 193 - -
Trre6g01031 325 SUPERFAMILY Protein kinase-like (PK-like) 74 216 IPR011009 -
Trre6g01031 325 SMART serkin_6 8 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre6g01031 325 Pfam Protein kinase domain 77 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01031 Trre-Chr6 8045209 8050605 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01031 103 252 EF-hand Containing Proteins AT2G35890 28.481 2.34e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Trre6g01031 Pkinase 1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01031 K08960 - gmx:100792736 225.713