Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01020 ATGAGTTTCTCTATTTTCCACCTTATCTCATTCTTTCTTCTTTGCTCTAATTTCTTGCACCAATCTTCTCATGCCATAAAAAAGGCAAGCTCAATATTTTTCCATTTAGTTTCACTTTTTAATTATATATATATATATATATATATATATATATATATATATATAAATATATACTCCCTCCGACATCACAATTTACTTGGTTCACACTTGGGAAGCCATGAGAAGGCTAAGGAAGCAATATTTTACTCATATAATAAACATATCAATGGTTTTGGTGCTGTACTTGAAGTAGAAGAAGCAACAAAAGTTGCAAAACATCCAAATGTAGTGTCTTTGTTTGAGAACAAAGGGCATGAATTGCAGACCACAAGATCATGGGAATTTCTTGGGCTAGAGAAGAATAATGGAGTGGTTCCTAAAGACTCTATATGGCAGAAGGCAAGATATGGTGATGGTACAATCATTGCTAACATTGATACAGGTGTTTGGCCTGAGTCCAAAAGTTTTAGTGATGATGGAATGGGTCCTGTCCCATCAAGATGGCGTGGGATCTGCCAACTTGACAATTTTCATTGCAATAGGAAATTGATAGGAGCAAGATTCTACAGCAAAGGTTATGAGTCAAAATTCGGAAGACTGAACCAATCCCTTTACACCGCGCGAGACGTATTAGGCCATGGCACACCAACATTATCGATCGCTGGAGGCAACTTTGTTTTAGGAGCAAATGTTTTCGGCTTTGGCAACGGTACTGCTAAAGGTGGATCACCAAGATCACATGTTGCAGCCTACAAGGTCTGCTGGCTTGGAACAATTGAAATCGAATGCACTGATGCAGATATCATAGAAGCATTTGACGATGCTATAAGTGATGGTGTTGATGTAATTTCATGTTCTCTCGGTAAAAATAGCCCGACAGAATTTTTCGAAGATGAAATTTCTATAGGGGCTTTTCATGCGATTGAAAATGGTGTAATGGTAGTTACTGGTGGAGGTGATTCAGGACCGAAATTGGGAACTGTTACTAATTTGGCACCTTGGTTGTTTAGTGTTGGTGCAAGCACAATAGATAGAAGCTTTATTAGTTATCTTCGACTTGGTGACAACAAGCACATAATAACGGGAACTAGTCTTTCTACAGGTTTACCATATGAGAAGTTCTACTCATTAATCAGTTCTGTAGATGCTAAAGCCGCTAATGCAACAATTGAAGACGCTCAAATTTGTGAGGTTGGAACTCTTGATCCTAACAAAGTAAAGGGAAAAATCTTGTTCTGTCTCGTAAGGGAGCTAGATGGATTAGTTTATGCGGAGGAAGAAGCTGTGTCTGGTGGAGCAATAGGACTTATTTTGGGAAATGATAAGCAACGCGGAAATGACATTATGGCATATCCTCATTTGTTGCCAACTTCACATATCAATTACACAGATGCTGAATATGTTTATTCCTACATCAAAGCCACTAAGACTCCAATGGCTTACATGAGTAAGGCAAAAACTGAATTGGGAGTAAAACCAGCTCCAGTAATAGCTTCACTCTCATCCAACCAATAA 1554 0.3829 MSFSIFHLISFFLLCSNFLHQSSHAIKKASSIFFHLVSLFNYIYIYIYIYIYIYINIYSLRHHNLLGSHLGSHEKAKEAIFYSYNKHINGFGAVLEVEEATKVAKHPNVVSLFENKGHELQTTRSWEFLGLEKNNGVVPKDSIWQKARYGDGTIIANIDTGVWPESKSFSDDGMGPVPSRWRGICQLDNFHCNRKLIGARFYSKGYESKFGRLNQSLYTARDVLGHGTPTLSIAGGNFVLGANVFGFGNGTAKGGSPRSHVAAYKVCWLGTIEIECTDADIIEAFDDAISDGVDVISCSLGKNSPTEFFEDEISIGAFHAIENGVMVVTGGGDSGPKLGTVTNLAPWLFSVGASTIDRSFISYLRLGDNKHIITGTSLSTGLPYEKFYSLISSVDAKAANATIEDAQICEVGTLDPNKVKGKILFCLVRELDGLVYAEEEAVSGGAIGLILGNDKQRGNDIMAYPHLLPTSHINYTDAEYVYSYIKATKTPMAYMSKAKTELGVKPAPVIASLSSNQ 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01020 517 CDD PA_subtilisin_like 363 493 - -
Trre6g01020 517 Pfam Subtilase family 150 368 IPR000209 GO:0006508|GO:0008236
Trre6g01020 517 ProSiteProfiles Serine proteases, subtilase domain profile. 125 517 - -
Trre6g01020 517 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 75 516 IPR045051 -
Trre6g01020 517 Pfam Peptidase inhibitor I9 62 117 IPR010259 -
Trre6g01020 517 CDD Peptidases_S8_3 118 380 IPR034197 -
Trre6g01020 517 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 56 121 IPR037045 -
Trre6g01020 517 Gene3D Peptidase S8/S53 domain 152 515 IPR036852 GO:0004252|GO:0006508
Trre6g01020 517 Gene3D - 357 502 - -
Trre6g01020 517 Pfam PA domain 407 479 IPR003137 -
Trre6g01020 517 FunFam subtilisin-like protease SBT1.5 357 502 - -
Trre6g01020 517 SUPERFAMILY Subtilisin-like 120 377 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01020 Trre-Chr6 7936633 7940082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01020 62 515 Subtilisin-like Serine Gene Family AT2G04160 55.799 1.22e-178 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01020 - - pcin:129318364 655.21