Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g01019 ATGACACTCCAATTTATTAAAGATCAATCTAAGGAAGATGCAACTCCATTTGGTTATGGAGCAGGACACATACAACCAGAACTTGCTATGGACCCTGGACTTATCTATGATCTAAACATTGATGATTACTTGAACTTCTTATGTTCTCATGGTTACAACCAAACACATATGAAAATGTTTTCTAGGAATCCTTACACTTGTCCTAAGTCTTACAATATGTTAGATTTTAACTATCCTTCAATCACTGTGCCTAATCTAGGGAAACACTCTGTAGAAATTAATCGTACAGTTACGAATGTTGGGTCGCCGGGTACATATCATGTGCATGTTAAGGAACCTCATGGGATTTCTGTTTTGGTTAAGCCAAGATCATTAAAATTTGATGAAGTTGGTGAAAAGAAGACATTTAAGGTTATCTTTAAGCTAAGAAAATCAACATCATCACCATCTTATGTGTTTGGTCACTTGTTGTTGTCTGATGGCAGACACAAAGTTATGAGTCCTCTTGTAGTCAGGCATAACTAG 525 0.3619 MTLQFIKDQSKEDATPFGYGAGHIQPELAMDPGLIYDLNIDDYLNFLCSHGYNQTHMKMFSRNPYTCPKSYNMLDFNYPSITVPNLGKHSVEINRTVTNVGSPGTYHVHVKEPHGISVLVKPRSLKFDEVGEKKTFKVIFKLRKSTSSPSYVFGHLLLSDGRHKVMSPLVVRHN 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g01019 174 Gene3D - 47 173 - -
Trre6g01019 174 Gene3D Peptidase S8/S53 domain 8 43 IPR036852 GO:0004252|GO:0006508
Trre6g01019 174 FunFam Subtilisin-like protease SBT1.5 47 174 - -
Trre6g01019 174 Pfam Fibronectin type-III domain 75 171 IPR041469 -
Trre6g01019 174 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 10 171 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre6g01019 Trre-Chr6 7935332 7935856 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre6g01019 6 172 Subtilisin-like Serine Gene Family AT2G04160 53.846 1.10e-56 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g01019 - - pcin:129318364 234.958