Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre6g00964 ATGAGTGGAACATACAAATGTGATGCCTATGGATGTAATAGGTCCTTCAAAAGACTCCAAGATTTGAAAACCCATAAAAATGTTCACAAAGAGAAAGTACCAACAATATGTGGACAATGTGGTGATGAATTCGAATCTACCAGAGCTTGTGCTGTTCATACGGGGCACCATAAAGTGCAAATGTTTCCTCCACCATATGCAAAAGTGATGCAAGTGCAACCAAAGAATGTAAAATGTCCAAACTGTGGAATCATTATTCCATTTGCAAACTATGCAAATCACATGAATCAATGTGGTTCACTCTAG 306 0.3791 MSGTYKCDAYGCNRSFKRLQDLKTHKNVHKEKVPTICGQCGDEFESTRACAVHTGHHKVQMFPPPYAKVMQVQPKNVKCPNCGIIIPFANYANHMNQCGSL 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre6g00964 101 SMART c2h2final6 35 57 IPR013087 -
Trre6g00964 101 SMART c2h2final6 5 29 IPR013087 -
Trre6g00964 101 SUPERFAMILY beta-beta-alpha zinc fingers 4 44 IPR036236 -
Trre6g00964 101 ProSitePatterns Zinc finger C2H2 type domain signature. 37 57 IPR013087 -
Trre6g00964 101 ProSitePatterns Zinc finger C2H2 type domain signature. 7 29 IPR013087 -
Trre6g00964 101 Gene3D Classic Zinc Finger 3 98 - -
Trre6g00964 101 ProSiteProfiles Zinc finger C2H2 type domain profile. 5 34 IPR013087 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Trre6g00964 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre6g00964 - K09215 pvm:113826706 52.7582